从一名健康日本婴儿粪便中分离出的柏之野双歧杆菌JCM 15439T的全基因组序列
Complete Genome Sequence of Bifidobacterium kashiwanohense JCM 15439T, Isolated from Feces from a Healthy Japanese Infant.
作者信息
Morita Hidetoshi, Toh Hidehiro, Nakano Akiyo, Oshima Kenshiro, Takagi Misako, Suda Wataru, Tanabe Soichi, Hattori Masahira
机构信息
School of Veterinary Medicine, Azabu University, Sagamihara, Kanagawa, Japan
Medical Institute of Bioregulation, Kyushu University, Fukuoka, Japan.
出版信息
Genome Announc. 2015 Apr 16;3(2):e00255-15. doi: 10.1128/genomeA.00255-15.
Abstract
We isolated Bifidobacterium kashiwanohense JCM 15439 from the feces of a healthy Japanese infant and proposed it as the type strain of a novel species within the genus Bifidobacterium. Here, we report the complete genome sequence of this organism.
摘要
我们从一名健康日本婴儿的粪便中分离出柏之叶双歧杆菌JCM 15439，并将其提议作为双歧杆菌属内一个新物种的模式菌株。在此，我们报告该菌株的完整基因组序列。
相似文献
1
Complete Genome Sequence of Bifidobacterium kashiwanohense JCM 15439T, Isolated from Feces from a Healthy Japanese Infant.从一名健康日本婴儿粪便中分离出的柏之野双歧杆菌JCM 15439T的全基因组序列
Genome Announc. 2015 Apr 16;3(2):e00255-15. doi: 10.1128/genomeA.00255-15.
2
Complete sequence analysis of two cryptic plasmids from Bifidobacterium kashiwanohense JCM 15439 (type strain) isolated from healthy infant feces.从健康婴儿粪便中分离的双歧杆菌 Kashiwanohense JCM 15439（模式菌株）的两个隐秘质粒的完整序列分析。
Anim Sci J. 2014 Feb;85(2):158-63. doi: 10.1111/asj.12095. Epub 2013 Jul 19.
3
Bifidobacterium kashiwanohense sp. nov., isolated from healthy infant faeces.卡氏双歧杆菌（Bifidobacterium kashiwanohense），从健康婴儿粪便中分离得到。
Int J Syst Evol Microbiol. 2011 Nov;61(Pt 11):2610-2615. doi: 10.1099/ijs.0.024521-0. Epub 2010 Dec 10.
4
Complete and Assembled Genome Sequence of Bifidobacterium kashiwanohense PV20-2, Isolated from the Feces of an Anemic Kenyan Infant.从一名贫血肯尼亚婴儿粪便中分离出的柏原双歧杆菌PV20-2的完整组装基因组序列
Genome Announc. 2015 Jan 22;3(1):e01467-14. doi: 10.1128/genomeA.01467-14.
5
Complete genome sequence of Bifidobacterium breve JCM 1192(T) isolated from infant feces.从婴儿粪便中分离出的短双歧杆菌JCM 1192(T)的全基因组序列。
J Biotechnol. 2015 Sep 20;210:81-2. doi: 10.1016/j.jbiotec.2015.06.414. Epub 2015 Jun 30.
6
Fucosyllactose and L-fucose utilization of infant Bifidobacterium longum and Bifidobacterium kashiwanohense.婴儿长双歧杆菌和柏原双歧杆菌对岩藻糖基乳糖和L-岩藻糖的利用
BMC Microbiol. 2016 Oct 26;16(1):248. doi: 10.1186/s12866-016-0867-4.
7
Complete genome sequence of Bifidobacterium bifidum JCM 1255(T) isolated from feces of a breast-fed infant.从母乳喂养婴儿粪便中分离出的两歧双歧杆菌JCM 1255(T)的全基因组序列。
J Biotechnol. 2015 Sep 20;210:66-7. doi: 10.1016/j.jbiotec.2015.06.413. Epub 2015 Jun 29.
8
Complete genome sequence of Bifidobacterium angulatum JCM 7096(T) isolated from human feces.从人粪便中分离得到的两歧双歧杆菌 JCM 7096(T)的全基因组序列。
J Biotechnol. 2015 Oct 10;211:10-1. doi: 10.1016/j.jbiotec.2015.06.412. Epub 2015 Jun 30.
9
Complete genome sequence of Bifidobacterium pseudocatenulatum JCM 1200(T) isolated from infant feces.从婴儿粪便中分离出的假链状双歧杆菌JCM 1200(T)的全基因组序列
J Biotechnol. 2015 Sep 20;210:68-9. doi: 10.1016/j.jbiotec.2015.06.416. Epub 2015 Jun 29.
10
Complete genome sequence of Bifidobacterium catenulatum JCM 1194(T) isolated from human feces.从人粪便中分离出的链状双歧杆菌JCM 1194(T)的全基因组序列
J Biotechnol. 2015 Sep 20;210:25-6. doi: 10.1016/j.jbiotec.2015.06.415. Epub 2015 Jun 29.
引用本文的文献
1
Molecular strategies for the utilisation of human milk oligosaccharides by infant gut-associated bacteria.利用婴儿肠道相关细菌利用人乳寡糖的分子策略。
FEMS Microbiol Rev. 2023 Nov 1;47(6). doi: 10.1093/femsre/fuad056.
2
Comparative genomic analysis revealed genetic divergence between Bifidobacterium catenulatum subspecies present in infant versus adult guts.比较基因组分析揭示了婴儿和成人肠道中存在的双歧杆菌连珠菌亚种之间的遗传差异。
BMC Microbiol. 2022 Jun 16;22(1):158. doi: 10.1186/s12866-022-02573-3.
3
Critical roles of a housekeeping sortase of probiotic in bacterium-host cell crosstalk.益生菌管家分选酶在细菌-宿主细胞相互作用中的关键作用。
iScience. 2021 Oct 28;24(11):103363. doi: 10.1016/j.isci.2021.103363. eCollection 2021 Nov 19.
4
Metabolism of the predominant human milk oligosaccharide fucosyllactose by an infant gut commensal.人乳寡糖岩藻糖基乳糖的主要代谢物由婴儿肠道共生菌产生。
Sci Rep. 2019 Oct 28;9(1):15427. doi: 10.1038/s41598-019-51901-7.
5
Fucosyllactose and L-fucose utilization of infant Bifidobacterium longum and Bifidobacterium kashiwanohense.婴儿长双歧杆菌和柏原双歧杆菌对岩藻糖基乳糖和L-岩藻糖的利用
BMC Microbiol. 2016 Oct 26;16(1):248. doi: 10.1186/s12866-016-0867-4.
本文引用的文献
1
Complete and Assembled Genome Sequence of Bifidobacterium kashiwanohense PV20-2, Isolated from the Feces of an Anemic Kenyan Infant.从一名贫血肯尼亚婴儿粪便中分离出的柏原双歧杆菌PV20-2的完整组装基因组序列
Genome Announc. 2015 Jan 22;3(1):e01467-14. doi: 10.1128/genomeA.01467-14.
2
Bifidobacteria strains isolated from stools of iron deficient infants can efficiently sequester iron.从缺铁婴儿粪便中分离出的双歧杆菌菌株能够有效地螯合铁。
BMC Microbiol. 2015 Jan 16;15(1):3. doi: 10.1186/s12866-014-0334-z.
3
Investigation of the evolutionary development of the genus Bifidobacterium by comparative genomics.通过比较基因组学对双歧杆菌属的进化发展进行研究。
Appl Environ Microbiol. 2014 Oct;80(20):6383-94. doi: 10.1128/AEM.02004-14. Epub 2014 Aug 8.
4
Complete sequence analysis of two cryptic plasmids from Bifidobacterium kashiwanohense JCM 15439 (type strain) isolated from healthy infant feces.从健康婴儿粪便中分离的双歧杆菌 Kashiwanohense JCM 15439（模式菌株）的两个隐秘质粒的完整序列分析。
Anim Sci J. 2014 Feb;85(2):158-63. doi: 10.1111/asj.12095. Epub 2013 Jul 19.
5
Bifidobacterium kashiwanohense sp. nov., isolated from healthy infant faeces.卡氏双歧杆菌（Bifidobacterium kashiwanohense），从健康婴儿粪便中分离得到。
Int J Syst Evol Microbiol. 2011 Nov;61(Pt 11):2610-2615. doi: 10.1099/ijs.0.024521-0. Epub 2010 Dec 10.
6
The genome sequence of Bifidobacterium longum subsp. infantis reveals adaptations for milk utilization within the infant microbiome.婴儿双歧杆菌亚种的基因组序列揭示了其在婴儿微生物群中对利用乳汁的适应性。
Proc Natl Acad Sci U S A. 2008 Dec 2;105(48):18964-9. doi: 10.1073/pnas.0809584105. Epub 2008 Nov 24.
7
Identifying bacterial genes and endosymbiont DNA with Glimmer.使用Glimmer识别细菌基因和内共生体DNA。
Bioinformatics. 2007 Mar 15;23(6):673-9. doi: 10.1093/bioinformatics/btm009. Epub 2007 Jan 19.
8
The tRNAscan-SE, snoscan and snoGPS web servers for the detection of tRNAs and snoRNAs.用于检测tRNA和snoRNA的tRNAscan-SE、snoscan和snoGPS网络服务器。
Nucleic Acids Res. 2005 Jul 1;33(Web Server issue):W686-9. doi: 10.1093/nar/gki366.
Zotero 插件