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应用动态光散射对蛋白质-去污剂复合物进行系统分析,以优化结晶试验的溶液。

Systematic analysis of protein-detergent complexes applying dynamic light scattering to optimize solutions for crystallization trials.

作者信息

Meyer Arne, Dierks Karsten, Hussein Rana, Brillet Karl, Brognaro Hevila, Betzel Christian

机构信息

Institute of Biochemistry and Molecular Biology, Laboratory for Structural Biology of Infection and Inflammation, University of Hamburg, c/o DESY, Building 22a, Notkestrasse 85, 22603 Hamburg, Germany.

UMR 7242-IMPReSs Platform, ESBS, Pôle API, 300 Boulevard Sébastien Brant, CS10413, 67412 Illkirch CEDEX, France.

出版信息

Acta Crystallogr F Struct Biol Commun. 2015 Jan 1;71(Pt 1):75-81. doi: 10.1107/S2053230X14027149.

Abstract

Detergents are widely used for the isolation and solubilization of membrane proteins to support crystallization and structure determination. Detergents are amphiphilic molecules that form micelles once the characteristic critical micelle concentration (CMC) is achieved and can solubilize membrane proteins by the formation of micelles around them. The results are presented of a study of micelle formation observed by in situ dynamic light-scattering (DLS) analyses performed on selected detergent solutions using a newly designed advanced hardware device. DLS was initially applied in situ to detergent samples with a total volume of approximately 2 µl. When measured with DLS, pure detergents show a monodisperse radial distribution in water at concentrations exceeding the CMC. A series of all-trans n-alkyl-β-D-maltopyranosides, from n-hexyl to n-tetradecyl, were used in the investigations. The results obtained verify that the application of DLS in situ is capable of distinguishing differences in the hydrodynamic radii of micelles formed by detergents differing in length by only a single CH2 group in their aliphatic tails. Subsequently, DLS was applied to investigate the distribution of hydrodynamic radii of membrane proteins and selected water-insoluble proteins in presence of detergent micelles. The results confirm that stable protein-detergent complexes were prepared for (i) bacteriorhodopsin and (ii) FetA in complex with a ligand as examples of transmembrane proteins. A fusion of maltose-binding protein and the Duck hepatitis B virus X protein was added to this investigation as an example of a non-membrane-associated protein with low water solubility. The increased solubility of this protein in the presence of detergent could be monitored, as well as the progress of proteolytic cleavage to separate the fusion partners. This study demonstrates the potential of in situ DLS to optimize solutions of protein-detergent complexes for crystallization applications.

摘要

去污剂被广泛用于膜蛋白的分离和增溶,以支持结晶和结构测定。去污剂是两亲分子,一旦达到特征性的临界胶束浓度(CMC)就会形成胶束,并通过在膜蛋白周围形成胶束来增溶膜蛋白。本文展示了一项研究结果,该研究通过使用新设计的先进硬件设备对选定的去污剂溶液进行原位动态光散射(DLS)分析来观察胶束形成。DLS最初原位应用于总体积约为2 μl的去污剂样品。用DLS测量时,纯去污剂在浓度超过CMC时在水中呈现单分散径向分布。研究中使用了一系列从正己基到正十四烷基的全反式正烷基-β-D-麦芽糖苷。获得的结果证实,原位应用DLS能够区分由脂肪族尾部仅相差一个CH₂基团的不同去污剂形成的胶束在流体动力学半径上的差异。随后,应用DLS研究了在去污剂胶束存在下膜蛋白和选定的水不溶性蛋白的流体动力学半径分布。结果证实,以细菌视紫红质和与配体结合的FetA作为跨膜蛋白的示例,制备了稳定的蛋白质-去污剂复合物。作为低水溶性非膜相关蛋白的示例,将麦芽糖结合蛋白与鸭乙型肝炎病毒X蛋白的融合体加入到该研究中。可以监测该蛋白在去污剂存在下溶解度的增加,以及蛋白酶解以分离融合伙伴的进展情况。这项研究证明了原位DLS在优化用于结晶应用的蛋白质-去污剂复合物溶液方面的潜力。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/7472/4304753/9f8deb6a4f6c/f-71-00075-fig1.jpg

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