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瑞宁斯,一个用于动态光散射分析的在线工具。

Raynals, an online tool for the analysis of dynamic light scattering.

机构信息

European Molecular Biology Laboratory, Notkestrasse 85, Hamburg, Germany.

Institut Pasteur, Université Paris Cité, CNRS UMR 3528, Plateforme de Biophysique Moléculaire, Paris, France.

出版信息

Acta Crystallogr D Struct Biol. 2023 Aug 1;79(Pt 8):673-683. doi: 10.1107/S2059798323004862. Epub 2023 Jul 10.

Abstract

Dynamic light scattering (DLS) is routinely employed to assess the homogeneity and size-distribution profile of samples containing microscopic particles in suspension or solubilized polymers. In this work, Raynals, user-friendly software for the analysis of single-angle DLS data that uses the Tikhonov-Phillips regularization, is introduced. Its performance is evaluated on simulated and experimental data generated by different DLS instruments for several proteins and gold nanoparticles. DLS data can easily be misinterpreted and the simulation tools available in Raynals allow the limitations of the measurement and its resolution to be understood. It was designed as a tool to address the quality control of biological samples during sample preparation and optimization and it helps in the detection of aggregates, showing the influence of large particles. Lastly, Raynals provides flexibility in the way that the data are presented, allows the export of publication-quality figures, is free for academic use and can be accessed online on the eSPC data-analysis platform at https://spc.embl-hamburg.de/.

摘要

动态光散射 (DLS) 通常用于评估悬浮或溶解聚合物中含有微观粒子的样品的均一性和大小分布情况。在这项工作中,引入了 Raynals,这是一款用于分析单角度 DLS 数据的用户友好型软件,它使用了 Tikhonov-Phillips 正则化。该软件的性能在不同 DLS 仪器生成的模拟和实验数据上进行了评估,涉及多种蛋白质和金纳米粒子。DLS 数据容易被误解,而 Raynals 中的模拟工具可以帮助理解测量的限制及其分辨率。它被设计为一种工具,用于在样品制备和优化过程中对生物样品进行质量控制,并有助于检测聚集体,显示出大颗粒的影响。最后,Raynals 提供了灵活的数据呈现方式,允许导出具有出版质量的图形,对学术用途免费,并可在 https://spc.embl-hamburg.de/ 上的 eSPC 数据分析平台上在线访问。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d140/10394669/82bdd61e5eed/d-79-00673-fig1.jpg

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