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钙离子和镁离子调节下游调节元件拮抗剂调节剂的构象动力学和稳定性。

Ca2+ and Mg2+ modulate conformational dynamics and stability of downstream regulatory element antagonist modulator.

作者信息

Pham Khoa, Dhulipala Gangadhar, Gonzalez Walter G, Gerstman Bernard S, Regmi Chola, Chapagain Prem P, Miksovska Jaroslava

机构信息

Department of Chemistry and Biochemistry, Florida International University, Miami, Florida, 33199.

出版信息

Protein Sci. 2015 May;24(5):741-51. doi: 10.1002/pro.2646. Epub 2015 Mar 10.

Abstract

Downstream Regulatory Element Antagonist Modulator (DREAM) belongs to the family of neuronal calcium sensors (NCS) that transduce the intracellular changes in Ca(2+) concentration into a variety of responses including gene expression, regulation of Kv channel activity, and calcium homeostasis. Despite the significant sequence and structural similarities with other NCS members, DREAM shows several features unique among NCS such as formation of a tetramer in the apo-state, and interactions with various intracellular biomacromolecules including DNA, presenilin, Kv channels, and calmodulin. Here we use spectroscopic techniques in combination with molecular dynamics simulation to study conformational changes induced by Ca(2+) /Mg(2+) association to DREAM. Our data indicate a minor impact of Ca(2+) association on the overall structure of the N- and C-terminal domains, although Ca(2+) binding decreases the conformational heterogeneity as evident from the decrease in the fluorescence lifetime distribution in the Ca(2+) bound forms of the protein. Time-resolved fluorescence data indicate that Ca(2+) binding triggers a conformational transition that is characterized by more efficient quenching of Trp residue. The unfolding of DREAM occurs through an partially unfolded intermediate that is stabilized by Ca(2+) association to EF-hand 3 and EF-hand 4. The native state is stabilized with respect to the partially unfolded state only in the presence of both Ca(2+) and Mg(2+) suggesting that, under physiological conditions, Ca(2+) free DREAM exhibits a high conformational flexibility that may facilitate its physiological functions.

摘要

下游调节元件拮抗剂调节剂(DREAM)属于神经元钙传感器(NCS)家族,该家族将细胞内Ca(2+)浓度的变化转化为多种反应,包括基因表达、Kv通道活性调节和钙稳态。尽管与其他NCS成员在序列和结构上有显著相似性,但DREAM在NCS中表现出几个独特的特征,如在无配体状态下形成四聚体,以及与包括DNA、早老素、Kv通道和钙调蛋白在内的各种细胞内生物大分子相互作用。在这里,我们使用光谱技术结合分子动力学模拟来研究Ca(2+)/Mg(2+)与DREAM结合诱导的构象变化。我们的数据表明,Ca(2+)结合对N端和C端结构域的整体结构影响较小,尽管Ca(2+)结合降低了构象异质性,这从蛋白质Ca(2+)结合形式的荧光寿命分布降低中可以明显看出。时间分辨荧光数据表明,Ca(2+)结合触发了一种构象转变,其特征是色氨酸残基的淬灭更有效。DREAM的去折叠通过一个部分去折叠的中间体发生,该中间体通过Ca(2+)与EF手3和EF手4的结合而稳定。仅在同时存在Ca(2+)和Mg(2+)的情况下,天然状态相对于部分去折叠状态才稳定,这表明在生理条件下,无Ca(2+)的DREAM表现出高构象灵活性,这可能有助于其生理功能。

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Molecular structure and target recognition of neuronal calcium sensor proteins.神经元钙传感器蛋白的分子结构与靶点识别
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Relating form and function of EF-hand calcium binding proteins.探讨 EF 手钙离子结合蛋白的结构与功能。
Acc Chem Res. 2011 Mar 15;44(3):171-9. doi: 10.1021/ar100110d. Epub 2011 Feb 11.

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