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通过构建四倍体玫瑰的遗传连锁图谱来填补空白。

Filling gaps with construction of a genetic linkage map in tetraploid roses.

作者信息

Yu Chao, Luo Le, Pan Huitang, Guo Xuelian, Wan Huihua, Zhang Qixiang

机构信息

Beijing Key Laboratory of Ornamental Plants Germplasm Innovation and Molecular Breeding, National Engineering Research Center for Floriculture, Beijing Laboratory of Urban and Rural Ecological Environment and College of Landscape Architecture, Beijing Forestry University Beijing, China.

出版信息

Front Plant Sci. 2015 Jan 13;5:796. doi: 10.3389/fpls.2014.00796. eCollection 2014.

DOI:10.3389/fpls.2014.00796
PMID:25628638
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC4292389/
Abstract

Rose (Rosa sp.) is one of the most economically important ornamental crops worldwide. The present work contains a genetic linkage map for tetraploid roses that was constructed from an F1 segregation population using AFLPs and SSRs on 189 individuals. The preliminary 'Yunzheng Xiawei' and 'Sun City' maps consisted of 298 and 255 markers arranged into 26 and 32 linkage groups, respectively. The recombined parental maps covered 737 and 752 cM of the genome, respectively. The integrated linkage map was composed of 295 polymorphic markers that spanned 874 cM, and it had a mean intermarker distance of 2.9 cM. In addition, a set of newly developed EST-SSRs that are distributed evenly throughout the mapping population were released. The work identified 67 anchoring points that came from 43 common SSRs. The results that were produced from a large number of individuals (189) and polymorphic SSRs (242) will enhance the ability to construct higher density consensus maps with the available diploid level rose maps, and they will definitely serve as a tool for accurate QTL detection and marker assisted selection.

摘要

玫瑰（蔷薇属）是全球经济价值最重要的观赏作物之一。目前的研究成果包含了一张四倍体玫瑰的遗传连锁图谱，该图谱是利用扩增片段长度多态性（AFLP）和简单序列重复（SSR）技术，基于一个由189个个体组成的F1分离群体构建而成。初步的“云蒸霞蔚”和“太阳城”图谱分别由298个和255个标记组成，这些标记被排列到26个和32个连锁群中。重组后的亲本图谱分别覆盖了基因组的737厘摩（cM）和752厘摩。整合后的连锁图谱由295个多态性标记组成，跨度为874厘摩，平均标记间距为2.9厘摩。此外，还公布了一组新开发的、均匀分布于整个作图群体的EST-SSR。该研究确定了来自43个常见SSR的67个锚定位点。大量个体（189个）和多态性SSR（242个）所产生的结果，将增强利用现有的二倍体水平玫瑰图谱构建更高密度一致性图谱的能力，并且它们必将成为精确检测数量性状基因座（QTL）和标记辅助选择的工具。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/e276/4292389/156271c462ba/fpls-05-00796-g0003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/e276/4292389/77ddf5b390d0/fpls-05-00796-g0001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/e276/4292389/d42a1fed684f/fpls-05-00796-g0002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/e276/4292389/156271c462ba/fpls-05-00796-g0003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/e276/4292389/77ddf5b390d0/fpls-05-00796-g0001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/e276/4292389/d42a1fed684f/fpls-05-00796-g0002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/e276/4292389/156271c462ba/fpls-05-00796-g0003.jpg

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Transcriptome and gene expression analysis during flower blooming in Rosa chinensis 'Pallida'.
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