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条纹野鲮(Labeo fimbriatus)(布洛赫,1975年)的完整线粒体基因组序列

Complete mitochondrial genome sequence of Labeo fimbriatus (Bloch, 1975).

作者信息

Sahoo Lakshman, Swain Subrat K, Bej Dillip, Das Sofia P, Jayasankar P, Das Paramananda

机构信息

a Fish Genetics and Biotechnology Division , ICAR - Central Institute of Freshwater Aquaculture , Kausalyaganga , Odisha , India.

出版信息

Mitochondrial DNA A DNA Mapp Seq Anal. 2016 Nov;27(6):4019-4020. doi: 10.3109/19401736.2014.1003824. Epub 2015 Jan 28.

Abstract

The complete mitochondrial genome of Labeo fimbriatus, the fringe-lipped carp, was determined for the first time. The genome was 16,614 bp in length and consisted of 13 protein-coding genes, 22 tRNA genes, 2 rRNA genes and one control region. Organization of genes and their order are in accordance with other vertebrates. The overall base composition on the plus strand was A: 32.35%, G: 15.46%, C: 27.54%, T: 24.647%, and the A + T content 57%. The control region contains a microsatellite, (TA)12, a putative termination-associated sequence and three conserved sequence blocks. This mitogenome sequence data would play an important role in population genetics and phylogenetics of cultivable carps of India.

摘要

首次测定了印度野鲮(Labeo fimbriatus),即缘唇鲤的完整线粒体基因组。该基因组长度为16,614 bp,由13个蛋白质编码基因、22个tRNA基因、2个rRNA基因和一个控制区组成。基因的组织及其顺序与其他脊椎动物一致。正链上的总体碱基组成为:A占32.35%,G占15.46%,C占27.54%,T占24.647%,A+T含量为57%。控制区包含一个微卫星(TA)12、一个假定的终止相关序列和三个保守序列块。这些线粒体基因组序列数据将在印度可养殖鲤鱼的种群遗传学和系统发育学中发挥重要作用。

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