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脂膜表面水合动力学中1/f噪声的起源。

Origin of 1/f noise in hydration dynamics on lipid membrane surfaces.

作者信息

Yamamoto Eiji, Akimoto Takuma, Yasui Masato, Yasuoka Kenji

机构信息

Department of Mechanical Engineering, Keio University, 3-14-1 Hiyoshi, Kohoku-ku, Yokohama 223-8522, Japan.

Department of Pharmacology, School of Medicine, Keio University, 35 Shinanomachi, Shinju-ku, Tokyo 160-8582, Japan.

出版信息

Sci Rep. 2015 Mar 6;5:8876. doi: 10.1038/srep08876.

Abstract

Water molecules on lipid membrane surfaces are known to contribute to membrane stability by connecting lipid molecules and acting as a water bridge. Although water structures and diffusivities near the membrane surfaces have been extensively studied, hydration dynamics on the surfaces has remained an open question. Here we investigate residence time statistics of water molecules on the surface of lipid membranes using all-atom molecular dynamics simulations. We show that hydration dynamics on the lipid membranes exhibits 1/f noise. Constructing a dichotomous process for the hydration dynamics, we find that residence times in each state follow a power-law with exponential cutoff and that the process can be regarded as a correlated renewal process where interoccurrence times are correlated. The results imply that the origin of the 1/f noise in hydration dynamics on the membrane surfaces is a combination of a power-law distribution with cutoff of interoccurrence times of switching events and a long-term correlation between the interoccurrence times. These results suggest that the 1/f noise attributed to the correlated renewal process may contribute to the stability of the hydration layers and lipid membranes.

摘要

脂质膜表面的水分子通过连接脂质分子并充当水桥来维持膜的稳定性。尽管已经对膜表面附近的水结构和扩散率进行了广泛研究,但表面水化动力学仍是一个悬而未决的问题。在这里,我们使用全原子分子动力学模拟研究脂质膜表面水分子的停留时间统计。我们发现脂质膜上的水化动力学呈现1/f噪声。通过构建水化动力学的二分过程,我们发现每个状态下的停留时间遵循具有指数截断的幂律,并且该过程可被视为一种关联更新过程,其中事件间时间是相关的。结果表明,膜表面水化动力学中1/f噪声的起源是开关事件间时间截断的幂律分布与事件间时间的长期相关性的结合。这些结果表明,归因于关联更新过程的1/f噪声可能有助于水化层和脂质膜的稳定性。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/003b/4351557/a94d3fd258cd/srep08876-f1.jpg

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