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新种土壤玛氏菌和新种土栖玛氏菌,从土壤中分离得到并对玛氏菌属进行修订描述

Marmoricola solisilvae sp. nov. and Marmoricola terrae sp. nov., isolated from soil and emended description of the genus Marmoricola.

作者信息

Kim Soo-Jin, Lim Jun-Muk, Hamada Moriyuki, Ahn Jae-Hyung, Weon Hang-Yeon, Suzuki Ken-Ichiro, Ahn Tae-Young, Kwon Soon-Wo

机构信息

Agricultural Microbiology Division, National Academy of Agricultural Science, Rural Development Administration, Wanju-gun, Jeollabuk-do, Republic of Korea.

Department of Microbiology, Dankook University, Anseo-dong, Cheonan 330-714, Republic of Korea.

出版信息

Int J Syst Evol Microbiol. 2015 Jun;65(Pt 6):1825-1830. doi: 10.1099/ijs.0.000184. Epub 2015 Mar 9.

Abstract

Two strains of species of the genus Marmoricola, designated KIS18-7T and JOS5-1T, were isolated from soil samples in Korea. The 16S rRNA gene sequence of strain KIS18-7T showed highest similarities with Marmoricola scoriae Sco-D01T (97.8 %), Marmoricola aequoreus SST-45T (97.6 %) and Marmoricola aurantiacus BC 361T (97.3 %), and strain JOS5-1T had highest sequence similarities with M. aequoreus SST-45T (97.5 %) and Marmoricola bigeumensis MSL-05T (97.3 %). The sequence similarity between KIS18-7T and JOS5-1T was 98.1 %. Phylogenetic analysis showed that these strains grouped with species of the genus Marmoricola. The major fatty acids of strain KIS18-7T were iso-C16 : 0 and C17 : 1ω8c, and C17 : 1ω8c, C18 : 0 10-methyl (TBSA), C18 : 1ω9c, C17 : 0 10-methyl and C16 : 0 2-OH for strain JOS5-1T. Strain KIS18-7T contained the polar lipids, diphosphatidylglycerol, phosphatidylglycerol, phosphatidylethanolamine, phosphatidylinositol and phosphatidylcholine, while strain JOS5-1T contained diphosphatidylglycerol, phosphatidylglycerol, phosphatidylinositol, one unknown aminolipid and two unknown phospholipids. The peptidoglycan of both strains contained ll-diaminopimelic acid as the diagnostic diamino acid and a single glycine residue as the interpeptide bridge (type A3γ). The major menaquinone of both strains was MK-8(H4). The G+C contents of the DNA of strains KIS18-7T and JOS5-1T were 68.0 mol% and 62.9 mol%, respectively. These data demonstrate that strains KIS18-7T and JOS5-1T are representatives of two novel species of the genus Marmoricola, for which the names Marmoricola solisilvae sp. nov. (type strain KIS18-7T = KACC 17307T = DSM 27140T = NBRC 109601T) and Marmoricola terrae sp. nov. (type strain JOS5-1T = KACC 17308T = DSM 27141T = NBRC 109602T) are proposed.

摘要

从韩国的土壤样本中分离出了两株马默里氏菌属(Marmoricola)的菌株,分别命名为KIS18 - 7T和JOS5 - 1T。菌株KIS18 - 7T的16S rRNA基因序列与火山马默里氏菌(Marmoricola scoriae)Sco - D01T(97.8%)、海蓝色马默里氏菌(Marmoricola aequoreus)SST - 45T(97.6%)和橙色马默里氏菌(Marmoricola aurantiacus)BC 361T(97.3%)显示出最高的相似性,而菌株JOS5 - 1T与海蓝色马默里氏菌SST - 45T(97.5%)和大邱马默里氏菌(Marmoricola bigeumensis)MSL - 05T(97.3%)具有最高的序列相似性。KIS18 - 7T和JOS5 - 1T之间的序列相似性为98.1%。系统发育分析表明,这些菌株与马默里氏菌属的物种聚在一起。菌株KIS18 - 7T的主要脂肪酸是异C16 : 0和C17 : 1ω8c,而菌株JOS5 - 1T的主要脂肪酸是C17 : 1ω8c、C18 : 0 10 - 甲基(TBSA)、C18 : 1ω9c、C17 : 0 10 - 甲基和C16 : 0 2 - OH。菌株KIS18 - 7T含有极性脂质双磷脂酰甘油、磷脂酰甘油、磷脂酰乙醇胺、磷脂酰肌醇和磷脂酰胆碱,而菌株JOS5 - 1T含有双磷脂酰甘油、磷脂酰甘油、磷脂酰肌醇、一种未知氨基脂质和两种未知磷脂。两株菌株的肽聚糖都含有ll - 二氨基庚二酸作为诊断性二氨基酸,以及单个甘氨酸残基作为肽间桥(A3γ型)。两株菌株的主要甲基萘醌都是MK - 8(H4)。菌株KIS18 - 7T和JOS5 - 1T的DNA的G + C含量分别为68.0 mol%和62.9 mol%。这些数据表明,菌株KIS18 - 7T和JOS5 - 1T是马默里氏菌属两个新物种的代表,为此提出了新物种名称土壤马默里氏菌(Marmoricola solisilvae)sp. nov.(模式菌株KIS

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