Yan Zheng-Fei, Lin Pei, Li Chang-Tian, Kook MooChang, Yi Tae-Hoo
Department of Oriental Medicinal Material and Processing, College of Life Science, Kyung Hee University Global Campus, 1732 Deokyoungdae-ro, Giheung-gu, Yongin-si, Gyeonggi-do 17104, Republic of Korea.
Engineering Research Center of Edible and Medicinal Fungi, Ministry of Education, Jilin Agricultural University, Changchun 130118, PR China.
Int J Syst Evol Microbiol. 2018 Mar;68(3):788-794. doi: 10.1099/ijsem.0.002584. Epub 2018 Jan 17.
A Gram-stain-positive, aerobic, non-motile and short-rod-shaped actinobacterium, designated THG-T121, was isolated from forest soil. Growth occurred at 10-40 °C (optimum 28-30 °C), at pH 6-8 (optimum 7) and at 0-4 % NaCl (optimum 1 %). Based on 16S rRNA gene sequence analysis, the nearest phylogenetic neighbours of strain THG-T121 were identified as Actinotalea ferrariae KCTC 29134 (97.9 %), Actinotalea fermentans KCTC 3251 (97.3 %), Cellulomonas carbonis KCTC 19824 (97.2 %). 16S rRNA gene sequence similarities among strain THG-T121 and other recognized species were lower than 97.0 %. The polar lipids were diphosphatidylglycerol, phosphatidylglycerol, phosphatidylinositol, two phosphatidylinositol mannosides, one unidentified phospholipid, three unidentified glycolipids and one unidentified lipid. The isoprenoid quinone was menaquinone (MK-10(H4)). The major fatty acids were anteiso-C15 : 0, anteiso-C15 : 1 A, C16 : 0, iso-C16 : 0, anteiso-C17 : 0 and iso-C17 : 0. The whole-cell sugars of strain THG-T121 were rhamnose, ribose, mannose and glucose. The peptidoglycan type of strain THG-T121 is A4β, containing l-Orn-D-Ser-L-Asp. The DNA G+C content of strain THG-T121 was 72.4 mol%. DNA-DNA hybridization values between strain THG-T121 and A. ferrariae KCTC 29134, A. fermentans KCTC 3251 and C. carbonis KCTC 19824 were 30.2 % (27.3 %, reciprocal analysis), 28.4 %, (17.3 %) and 16.9 %, (9.3 %), respectively. On the basis of the phylogenetic analysis, chemotaxonomic data, physiological characteristics and DNA-DNA hybridization data, strain THG-T121 represents a novel species of the genus Actinotalea, for which the name Actinotaleasolisilvae sp. nov. is proposed. The type strain is THG-T121 (=KACC 19191=CGMCC 4.7389).
从森林土壤中分离出一株革兰氏阳性、需氧、无运动性的短杆状放线菌,命名为THG-T121。该菌在10-40°C(最适温度28-30°C)、pH 6-8(最适pH 7)和0-4% NaCl(最适1%)条件下生长。基于16S rRNA基因序列分析,菌株THG-T121最近的系统发育邻种被鉴定为铁色放线单胞菌KCTC 29134(相似度97.9%)、发酵放线单胞菌KCTC 3251(相似度97.3%)、碳嗜纤维菌KCTC 19824(相似度97.2%)。菌株THG-T121与其他已确认物种的16S rRNA基因序列相似度低于97.0%。极性脂包括双磷脂酰甘油、磷脂酰甘油、磷脂酰肌醇、两种磷脂酰肌醇甘露糖苷、一种未鉴定的磷脂、三种未鉴定的糖脂和一种未鉴定的脂类。类异戊二烯醌为甲基萘醌(MK-10(H4))。主要脂肪酸为anteiso-C15:0、anteiso-C15:1 A、C16:0、iso-C16:0、anteiso-C17:0和iso-C17:0。菌株THG-T121的全细胞糖包括鼠李糖、核糖、甘露糖和葡萄糖。菌株THG-T121的肽聚糖类型为A4β,含有l-鸟氨酸-D-丝氨酸-L-天冬氨酸。菌株THG-T121的DNA G+C含量为72.4 mol%。菌株THG-T121与铁色放线单胞菌KCTC 29134、发酵放线单胞菌KCTC 3251和碳嗜纤维菌KCTC 19824的DNA-DNA杂交值分别为30.2%(反向分析为27.3%)、28.4%(17.3%)和16.9%(9.3%)。基于系统发育分析、化学分类数据、生理特征和DNA-DNA杂交数据,菌株THG-T121代表放线单胞菌属的一个新物种,为此提出新名称土壤森林放线单胞菌(Actinotalea solisilvae sp. nov.)。模式菌株为THG-T121(=KACC 19191=CGMCC 4.7389)。