Ghose Jayeeta, Bhattacharyya N P
a Crystallography and Molecular Biology Division; Saha Institute of Nuclear Physics ; Bidhannagar, Kolkata , India.
RNA Biol. 2015;12(4):457-77. doi: 10.1080/15476286.2015.1014288.
MicroRNA (miRNA) genes generally share many features common to those of protein coding genes. Various transcription factors (TFs) and co-regulators are also known to regulate miRNA genes. Here we identify novel p53 and NFκB p65/RelA responsive miRNAs and demonstrate that these 2 TFs bind to the regulatory sequences of miR-100, -146a and -150 in both mouse striatal and human cervical carcinoma cells and regulate their expression. p53 represses the miRNAs while NFκB p65/RelA induces them. Further, we provide evidence that exogenous p53 inhibits NFκB p65/RelA activity by reducing its nuclear content and competing with it for CBP binding. This suggests for the existence of a functional cross-talk between the 2 TFs in regulating miRNA expression. Moreover, promoter occupancy assay reveals that exogenous p53 excludes NFκB p65/RelA from its binding site in the upstream sequence of miR-100 gene thereby causing its repression. Thus, our work identifies novel p53 and NFκB p65/RelA responsive miRNAs in human and mouse and uncovers possible mechanisms of co-regulation of miR-100. It is to be mentioned here that cross-talks between p53 and NFκB p65/RelA have been observed to define the outcome of several biological processes and that the pro-apoptotic effect of p53 and the pro-survival functions of NFκB can be largely mediated via the biological roles of the miRNAs these TFs regulate. Our observation with cell lines thus provides an important platform upon which further work is to be done to establish the biological significance of such co-regulation of miRNAs by p53 and NFκB p65/RelA.
微小RNA(miRNA)基因通常具有许多与蛋白质编码基因共有的特征。各种转录因子(TFs)和共调节因子也已知可调节miRNA基因。在这里,我们鉴定了新的p53和NFκB p65/RelA反应性miRNA,并证明这两种TFs在小鼠纹状体和人宫颈癌细胞中均与miR-100、-146a和-150的调控序列结合并调节它们的表达。p53抑制这些miRNA,而NFκB p65/RelA诱导它们。此外,我们提供证据表明,外源性p53通过减少其核含量并与它竞争CBP结合来抑制NFκB p65/RelA活性。这表明在调节miRNA表达方面,这两种TFs之间存在功能性相互作用。此外,启动子占据分析表明,外源性p53将NFκB p65/RelA从其在miR-100基因上游序列中的结合位点排除,从而导致其抑制。因此,我们的工作在人和小鼠中鉴定了新的p53和NFκB p65/RelA反应性miRNA,并揭示了miR-100共调节的可能机制。这里需要提到的是,已经观察到p53和NFκB p65/RelA之间的相互作用决定了几个生物学过程的结果,并且p53的促凋亡作用和NFκB的促生存功能在很大程度上可以通过这些TFs调节的miRNA的生物学作用来介导。我们对细胞系的观察结果因此提供了一个重要的平台,在此基础上需要进一步开展工作,以确定p53和NFκB p65/RelA对miRNA进行这种共调节的生物学意义。