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来自智利的33株肠炎沙门氏菌临床和野生动物分离株的基因组序列草图

Draft Genome Sequences of 33 Salmonella enterica Clinical and Wildlife Isolates from Chile.

作者信息

Toro Magaly, Retamal Patricio, Allard Marc, Brown Eric W, Evans Peter, Gonzalez-Escalona Narjol

机构信息

Facultad de Ciencias Veterinarias y Pecuarias, Universidad de Chile, Santiago, Chile.

Center for Food Safety and Applied Nutrition, Division of Microbiology, Food and Drug Administration, College Park, Maryland, USA.

出版信息

Genome Announc. 2015 Mar 19;3(2):e00054-15. doi: 10.1128/genomeA.00054-15.

DOI:10.1128/genomeA.00054-15
PMID:25792040
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC4395066/
Abstract

Salmonella enterica causes health problem worldwide. The relationships among strains that are from the same serotype but different hosts, countries, and continents remain elusive. Few genome sequences are available from S. enterica isolates from South America. Therefore, we sequenced the genomes of 33 strains from diverse sources isolated in Chile and determined that they were of different serotypes. These genomes will improve phylogenetic analysis of Salmonella strains from Chile and the rest of South America.

摘要

肠炎沙门氏菌在全球范围内引发健康问题。来自相同血清型但不同宿主、国家和大陆的菌株之间的关系仍然不明。来自南美洲的肠炎沙门氏菌分离株的基因组序列很少。因此,我们对从智利分离的33株不同来源的菌株进行了全基因组测序,并确定它们属于不同的血清型。这些基因组将有助于改进对来自智利和南美洲其他地区的沙门氏菌菌株的系统发育分析。

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In silico detection and typing of plasmids using PlasmidFinder and plasmid multilocus sequence typing.使用质粒查找工具(PlasmidFinder)和质粒多位点序列分型进行质粒的电子检测和分型
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Serotype-associated polymorphisms in a partial rpoB gene sequence of Salmonella enterica.肠沙门氏菌 rpoB 基因部分序列中与血清型相关的多态性。
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Draft Genome Sequence of Salmonella enterica Serovar Typhi Strain STH2370.肠炎沙门氏菌伤寒血清型菌株STH2370的基因组序列草图
Genome Announc. 2014 Feb 20;2(1):e00104-14. doi: 10.1128/genomeA.00104-14.
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Identification of diverse Salmonella serotypes, virulotypes, and antimicrobial resistance phenotypes in waterfowl from Chile.智利水禽中不同沙门氏菌血清型、毒力型及抗菌药物耐药表型的鉴定
Vector Borne Zoonotic Dis. 2013 Dec;13(12):884-7. doi: 10.1089/vbz.2013.1408. Epub 2013 Oct 9.
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