Bissaro Bastien, Monsan Pierre, Fauré Régis, O'Donohue Michael J
*Université de Toulouse, INSA, UPS, INP, LISBP, 135 Avenue de Rangueil, F-31077 Toulouse, France.
Biochem J. 2015 Apr 1;467(1):17-35. doi: 10.1042/BJ20141412.
Carbohydrates are ubiquitous in Nature and play vital roles in many biological systems. Therefore the synthesis of carbohydrate-based compounds is of considerable interest for both research and commercial purposes. However, carbohydrates are challenging, due to the large number of sugar subunits and the multiple ways in which these can be linked together. Therefore, to tackle the challenge of glycosynthesis, chemists are increasingly turning their attention towards enzymes, which are exquisitely adapted to the intricacy of these biomolecules. In Nature, glycosidic linkages are mainly synthesized by Leloir glycosyltransferases, but can result from the action of non-Leloir transglycosylases or phosphorylases. Advantageously for chemists, non-Leloir transglycosylases are glycoside hydrolases, enzymes that are readily available and exhibit a wide range of substrate specificities. Nevertheless, non-Leloir transglycosylases are unusual glycoside hydrolases in as much that they efficiently catalyse the formation of glycosidic bonds, whereas most glycoside hydrolases favour the mechanistically related hydrolysis reaction. Unfortunately, because non-Leloir transglycosylases are almost indistinguishable from their hydrolytic counterparts, it is unclear how these enzymes overcome the ubiquity of water, thus avoiding the hydrolytic reaction. Without this knowledge, it is impossible to rationally design non-Leloir transglycosylases using the vast diversity of glycoside hydrolases as protein templates. In this critical review, a careful analysis of literature data describing non-Leloir transglycosylases and their relationship to glycoside hydrolase counterparts is used to clarify the state of the art knowledge and to establish a new rational basis for the engineering of glycoside hydrolases.
碳水化合物在自然界中无处不在,在许多生物系统中发挥着至关重要的作用。因此,基于碳水化合物的化合物的合成对于研究和商业目的都具有相当大的吸引力。然而,碳水化合物具有挑战性,这是由于糖亚基数量众多以及它们相互连接的多种方式。因此,为了应对糖合成的挑战,化学家们越来越将注意力转向酶,这些酶非常适合这些生物分子的复杂性。在自然界中,糖苷键主要由勒洛伊尔糖基转移酶合成,但也可能由非勒洛伊尔转糖基酶或磷酸化酶的作用产生。对化学家来说有利的是,非勒洛伊尔转糖基酶是糖苷水解酶,这些酶很容易获得并且表现出广泛的底物特异性。然而,非勒洛伊尔转糖基酶是不寻常的糖苷水解酶,因为它们能有效地催化糖苷键的形成,而大多数糖苷水解酶则倾向于与之机理相关的水解反应。不幸的是,由于非勒洛伊尔转糖基酶与其水解对应物几乎无法区分,目前尚不清楚这些酶如何克服水的普遍性,从而避免水解反应。没有这些知识,就不可能以大量多样的糖苷水解酶作为蛋白质模板来合理设计非勒洛伊尔转糖基酶。在这篇批判性综述中,通过对描述非勒洛伊尔转糖基酶及其与糖苷水解酶对应物关系的文献数据进行仔细分析,以阐明现有知识的状况,并为糖苷水解酶的工程改造建立新的合理基础。