Ortiz-Rosario Alexis, Adeli Hojjat, Buford John A
Department of Biomedical Engineering, The Ohio State University, 470 Hitchcock Hall, 2070 Neil Avenue, Columbus, OH 43210, United States.
Department of Biomedical Engineering, The Ohio State University, 470 Hitchcock Hall, 2070 Neil Avenue, Columbus, OH 43210, United States; Department of Biomedical Informatics, The Ohio State University, 470 Hitchcock Hall, 2070 Neil Avenue, Columbus, OH 43210, United States; Department of Civil and Environmental Engineering and Geodetic Science, The Ohio State University, 470 Hitchcock Hall, 2070 Neil Avenue, Columbus, OH 43210, United States; Department of Electrical and Computer Engineering, The Ohio State University, 470 Hitchcock Hall, 2070 Neil Avenue, Columbus, OH 43210, United States; Department of Neuroscience, The Ohio State University, 470 Hitchcock Hall, 2070 Neil Avenue, Columbus, OH 43210, United States.
J Neurosci Methods. 2015 May 15;246:106-18. doi: 10.1016/j.jneumeth.2015.03.014. Epub 2015 Mar 17.
The proper isolation of action potentials recorded extracellularly from neural tissue is an active area of research in the fields of neuroscience and biomedical signal processing. This paper presents an isolation methodology for neural recordings using the wavelet transform (WT), a statistical thresholding scheme, and the principal component analysis (PCA) algorithm. The effectiveness of five different mother wavelets was investigated: biorthogonal, Daubachies, discrete Meyer, symmetric, and Coifman; along with three different wavelet coefficient thresholding schemes: fixed form threshold, Stein's unbiased estimate of risk, and minimax; and two different thresholding rules: soft and hard thresholding. The signal quality was evaluated using three different statistical measures: mean-squared error, root-mean squared, and signal to noise ratio. The clustering quality was evaluated using two different statistical measures: isolation distance, and L-ratio. This research shows that the selection of the mother wavelet has a strong influence on the clustering and isolation of single unit neural activity, with the Daubachies 4 wavelet and minimax thresholding scheme performing the best.
从神经组织中细胞外记录动作电位的适当分离是神经科学和生物医学信号处理领域中一个活跃的研究领域。本文提出了一种使用小波变换(WT)、统计阈值方案和主成分分析(PCA)算法进行神经记录分离的方法。研究了五种不同母小波的有效性:双正交小波、Daubachies小波、离散Meyer小波、对称小波和Coifman小波;以及三种不同的小波系数阈值方案:固定形式阈值、Stein无偏风险估计和极小极大;还有两种不同的阈值规则:软阈值和硬阈值。使用三种不同的统计量评估信号质量:均方误差、均方根和信噪比。使用两种不同的统计量评估聚类质量:分离距离和L比率。本研究表明,母小波的选择对单个单元神经活动的聚类和分离有很大影响,其中Daubachies 4小波和极小极大阈值方案表现最佳。