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将属于I系(血清型4b、1/2b和3b)的人源单核细胞增生李斯特菌脉冲场凝胶电泳(PFGE)类型划分成PFGE组。

Division of Human Listeria monocytogenes Pulsed-Field Gel Electrophoresis (PFGE) Types Belonging to Lineage I (Serovar 4b, 1/2b, and 3b) into PFGE Groups.

作者信息

Lopez-Valladares Gloria, Danielsson-Tham Marie-Louise, Goering Richard V, Tham Wilhelm

机构信息

1 School of Hospitality, Culinary Arts and Meal Science, Örebro University , Grythyttan, Sweden .

出版信息

Foodborne Pathog Dis. 2015 May;12(5):447-53. doi: 10.1089/fpd.2014.1880. Epub 2015 Mar 24.

DOI:10.1089/fpd.2014.1880
PMID:25803595
Abstract

The 63 pulsed-field gel electrophoresis (PFGE) types identified among 427 clinical isolates of Listeria monocytogenes that were characterized in a previous study by serotyping and PFGE (AscI) could be further divided into 17 PFGE groups. While the 63 PFGE types, all part of lineage I, were established based on the number and distribution of all bands in each DNA profile, the 17 PFGE groups were based on the configuration of small bands with sizes <145.5 kb. The 30 PFGE types of L. monocytogenes serovar 4b isolates (n=334) were divided into 8 PFGE groups; the 32 PFGE types of serovar 1/2b isolates (n=90) and the serovar 3b isolates (n=3, 1 PFGE type) were divided into 9 PFGE groups. An association was observed between PFGE groups and serovars. L. monocytogenes isolates belonging to PFGE groups I, J, Q, R, X, Z, Ö-4, and Ö-5 all shared serovar 4b, whereas isolates from PFGE groups D, G, O, P, T, U, Ö-1, Ö-2, and Ö-3 shared serovar 1/2b. Small fragments <33.3 kb were nonvisible in all L. monocytogenes isolates. From the results of the present study, a procedure for accelerating the identification of PFGE types when analyzing new PFGE profiles can be suggested. Therefore, we propose a stepwise procedure to PFGE profiling by first identifying the PFGE group using the smaller band patterns <145.5 kb, and then determining PFGE types based on the band patterns >145.5 kb.

摘要

在先前一项通过血清分型和脉冲场凝胶电泳(AscI)对427株单核细胞增生李斯特菌临床分离株进行特征分析的研究中,所鉴定出的63种脉冲场凝胶电泳(PFGE)型可进一步分为17个PFGE组。虽然这63种PFGE型均属于谱系I,是根据每个DNA图谱中所有条带的数量和分布确定的,但17个PFGE组是基于大小<145.5 kb的小条带的构型划分的。单核细胞增生李斯特菌血清型4b分离株(n = 334)的30种PFGE型被分为8个PFGE组;血清型1/2b分离株(n = 90)的32种PFGE型和血清型3b分离株(n = 3,1种PFGE型)被分为9个PFGE组。观察到PFGE组与血清型之间存在关联。属于PFGE组I、J、Q、R、X、Z、Ö - 4和Ö - 5的单核细胞增生李斯特菌分离株均为血清型4b,而来自PFGE组D、G、O、P、T、U、Ö - 1、Ö - 2和Ö - 3的分离株为血清型1/2b。在所有单核细胞增生李斯特菌分离株中均未见到<33.3 kb的小片段。根据本研究结果,可提出一种在分析新的PFGE图谱时加速PFGE型鉴定的程序。因此,我们提出一种PFGE图谱分析的逐步程序,首先使用<145.5 kb的较小条带模式鉴定PFGE组,然后根据>145.5 kb的条带模式确定PFGE型。

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