Mawlankar Rahul R, Mual Poonam, Sonalkar Vidya V, Thorat Meghana N, Verma Ashish, Srinivasan Krishnamurthi, Dastager Syed G
NCIM-Resource Center, CSIR-National Chemical Laboratory, Pune-411008, Maharashtra, India.
, Microbial Type Culture Collection and Gene Bank (MTCC), CSIR-Institute of Microbial Technology, Sector-39A, Chandigarh-160036, India.
Int J Syst Evol Microbiol. 2015 Jul;65(7):2064-2070. doi: 10.1099/ijs.0.000221. Epub 2015 Mar 31.
A novel bacterium (strain NIO-1002(T)) belonging to the genus Microbacterium was isolated from a marine sediment sample in Chorao Island, Goa Province, India. Its morphology, physiology, biochemical features and 16S rRNA gene sequence were characterized. Cells of this strain were Gram-stain-positive, non-motile, non-spore-forming rods that formed yellow-pigmented colonies. It grew in 0-12% (w/v) NaCl and at 25-37 °C, with optimal growth at 30 °C. Phylogenetic analysis based on 16S rRNA gene sequences indicated that strain NIO-1002(T) is associated with members of the genus Microbacterium, with highest sequence similarity with Microbacterium hominis CIP 105731(T) (98.1%) and Microbacterium testaceum KCTC 9103(T) (98.0%). Within the phylogenetic tree, this novel strain shared a branching point with M. hominis CIP 105731(T). The DNA G+C content was 66.5 mol% and DNA-DNA hybridization relatedness between NIO-1002(T), M. hominis CIP 105731(T) and M. testaceum KCTC 9103(T) was 39.0 ± 2.0% and 41.0 ± 2.0%, respectively. The major fatty acids were ai-C15 : 0, i-C16 : 0 and ai-C17 : 0 and the diamino acid in the cell-wall peptidoglycan of NIO-1002(T) was lysine. Data obtained from DNA-DNA hybridization and chemotaxonomic phenotypic analysis support the conclusion that strain NIO-1002(T) represents a novel species within the genus Microbacterium. The name Microbacterium enclense sp. nov. is proposed, with NIO-1002(T) ( = NCIM 5454(T) = DSM 25125(T) = CCTCC AB 2011120(T)) as the type strain.
从印度果阿邦乔拉奥岛的一份海洋沉积物样本中分离出一种属于微小杆菌属的新型细菌(菌株NIO-1002(T))。对其形态、生理、生化特征及16S rRNA基因序列进行了表征。该菌株细胞革兰氏染色阳性,无运动性,不形成芽孢,呈杆状,形成黄色色素菌落。它能在0-12%(w/v)NaCl浓度及25-37°C条件下生长,最适生长温度为30°C。基于16S rRNA基因序列的系统发育分析表明,菌株NIO-1002(T)与微小杆菌属成员相关,与人类微小杆菌CIP 105731(T)(98.1%)和铁锈色微小杆菌KCTC 9103(T)(98.0%)的序列相似性最高。在系统发育树中,该新菌株与人类微小杆菌CIP 105731(T)共有一个分支点。DNA G+C含量为66.5 mol%,NIO-1002(T)与人类微小杆菌CIP 105731(T)及铁锈色微小杆菌KCTC 9103(T)之间的DNA-DNA杂交相关性分别为39.0±2.0%和41.0±2.0%。主要脂肪酸为ai-C15 : 0、i-C16 : 0和ai-C17 : 0,NIO-1002(T)细胞壁肽聚糖中的二氨基酸为赖氨酸。从DNA-DNA杂交和化学分类表型分析获得的数据支持菌株NIO-1002(T)代表微小杆菌属内一个新物种的结论。提议将其命名为封闭微小杆菌新种(Microbacterium enclense sp. nov.),以NIO-1002(T)(=NCIM 5454(T)=DSM 25125(T)=CCTCC AB 2011120(T))作为模式菌株。