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新一代测序揭示了体内N(2),3-乙烯鸟嘌呤损伤的生物学意义。

Next-generation sequencing reveals the biological significance of the N(2),3-ethenoguanine lesion in vivo.

作者信息

Chang Shiou-chi, Fedeles Bogdan I, Wu Jie, Delaney James C, Li Deyu, Zhao Linlin, Christov Plamen P, Yau Emily, Singh Vipender, Jost Marco, Drennan Catherine L, Marnett Lawrence J, Rizzo Carmelo J, Levine Stuart S, Guengerich F Peter, Essigmann John M

机构信息

Department of Biological Engineering, Massachusetts Institute of Technology, Cambridge, MA 02139, United States Center for Environmental Health Sciences, Massachusetts Institute of Technology, Cambridge, MA 02139, United States.

Department of Biological Engineering, Massachusetts Institute of Technology, Cambridge, MA 02139, United States Center for Environmental Health Sciences, Massachusetts Institute of Technology, Cambridge, MA 02139, United States Department of Chemistry, Massachusetts Institute of Technology, Cambridge, MA 02139, United States.

出版信息

Nucleic Acids Res. 2015 Jun 23;43(11):5489-500. doi: 10.1093/nar/gkv243. Epub 2015 Apr 2.

Abstract

Etheno DNA adducts are a prevalent type of DNA damage caused by vinyl chloride (VC) exposure and oxidative stress. Etheno adducts are mutagenic and may contribute to the initiation of several pathologies; thus, elucidating the pathways by which they induce cellular transformation is critical. Although N(2),3-ethenoguanine (N(2),3-εG) is the most abundant etheno adduct, its biological consequences have not been well characterized in cells due to its labile glycosidic bond. Here, a stabilized 2'-fluoro-2'-deoxyribose analog of N(2),3-εG was used to quantify directly its genotoxicity and mutagenicity. A multiplex method involving next-generation sequencing enabled a large-scale in vivo analysis, in which both N(2),3-εG and its isomer 1,N(2)-ethenoguanine (1,N(2)-εG) were evaluated in various repair and replication backgrounds. We found that N(2),3-εG potently induces G to A transitions, the same mutation previously observed in VC-associated tumors. By contrast, 1,N(2)-εG induces various substitutions and frameshifts. We also found that N(2),3-εG is the only etheno lesion that cannot be repaired by AlkB, which partially explains its persistence. Both εG lesions are strong replication blocks and DinB, a translesion polymerase, facilitates the mutagenic bypass of both lesions. Collectively, our results indicate that N(2),3-εG is a biologically important lesion and may have a functional role in VC-induced or inflammation-driven carcinogenesis.

摘要

乙烯基DNA加合物是氯乙烯(VC)暴露和氧化应激导致的一种常见DNA损伤类型。乙烯基加合物具有致突变性,可能会引发多种病变;因此,阐明它们诱导细胞转化的途径至关重要。尽管N(2),3-乙烯基鸟嘌呤(N(2),3-εG)是最丰富的乙烯基加合物,但其糖苷键不稳定,导致其在细胞中的生物学后果尚未得到充分表征。在此,我们使用一种稳定的N(2),3-εG的2'-氟-2'-脱氧核糖类似物直接量化其遗传毒性和致突变性。一种涉及下一代测序的多重方法实现了大规模体内分析,其中在各种修复和复制背景下评估了N(2),3-εG及其异构体1,N(2)-乙烯基鸟嘌呤(1,N(2)-εG)。我们发现N(2),3-εG强烈诱导G到A的转换,这与之前在VC相关肿瘤中观察到的突变相同。相比之下,1,N(2)-εG诱导各种替换和移码突变。我们还发现N(2),3-εG是唯一不能被AlkB修复的乙烯基损伤,这部分解释了它的持久性。两种εG损伤都是强大的复制障碍,而跨损伤聚合酶DinB促进了两种损伤的诱变绕过。总的来说,我们的结果表明N(2),3-εG是一种生物学上重要的损伤,可能在VC诱导或炎症驱动的致癌过程中发挥功能性作用。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c10a/4477646/efa72a1abc54/gkv243fig1.jpg

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