植物乳杆菌B21菌株的全基因组序列，该菌株是从越南发酵香肠“Nem Chua”中分离出的产细菌素菌株。
Complete Genome Sequence of Lactobacillus plantarum Strain B21, a Bacteriocin-Producing Strain Isolated from Vietnamese Fermented Sausage Nem Chua.
作者信息
Golneshin Aida, Adetutu Eric, Ball Andrew S, May Bee K, Van Thi Thu Hao, Smith Andrew T
机构信息
School of Applied Sciences, RMIT University, Melbourne, Victoria, Australia.
School of Applied Sciences, RMIT University, Melbourne, Victoria, Australia
出版信息
Genome Announc. 2015 Apr 2;3(2):e00055-15. doi: 10.1128/genomeA.00055-15.
Abstract
Lactobacillus plantarum strain B21 was isolated from Vietnamese sausage (nem chua) and demonstrated broad antimicrobial activity due to the production of bacteriocins. Here, we report the complete genome sequence of this strain (3,284,260 bp).
摘要
植物乳杆菌B21菌株是从越南香肠（发酵香肠）中分离出来的，由于其能产生细菌素，因而具有广泛的抗菌活性。在此，我们报告该菌株的完整基因组序列（3,284,260 bp）。
相似文献
1
Complete Genome Sequence of Lactobacillus plantarum Strain B21, a Bacteriocin-Producing Strain Isolated from Vietnamese Fermented Sausage Nem Chua.植物乳杆菌B21菌株的全基因组序列，该菌株是从越南发酵香肠“Nem Chua”中分离出的产细菌素菌株。
Genome Announc. 2015 Apr 2;3(2):e00055-15. doi: 10.1128/genomeA.00055-15.
2
Draft Genome Sequence of Strain A6, a Strong Acid Producer Isolated from a Vietnamese Fermented Sausage (Nem Chua).从越南发酵香肠（Nem Chua）中分离出的强酸产生菌A6菌株的基因组序列草图
Genome Announc. 2017 Oct 12;5(41):e00987-17. doi: 10.1128/genomeA.00987-17.
3
In vitro Characterization of Bacteriocin Produced by Lactic Acid Bacteria Isolated from Nem Chua, a Traditional Vietnamese Fermented Pork.从越南传统发酵猪肉“Nem Chua”中分离出的乳酸菌所产细菌素的体外特性研究
Korean J Food Sci Anim Resour. 2015;35(4):473-8. doi: 10.5851/kosfa.2015.35.4.473. Epub 2015 Aug 31.
4
Discovery and characterisation of circular bacteriocin plantacyclin B21AG from B21.从B21中发现并鉴定环状细菌素植物环素B21AG。
Heliyon. 2020 Aug 21;6(8):e04715. doi: 10.1016/j.heliyon.2020.e04715. eCollection 2020 Aug.
5
Characterization and purification of a new bacteriocin with a broad inhibitory spectrum produced by Lactobacillus plantarum lp 31 strain isolated from dry-fermented sausage.一株植物乳杆菌 lp31 所产广谱抑菌素的特性与分离纯化。该菌分离自干发酵香肠。
J Appl Microbiol. 2009 Jun;106(6):2031-40. doi: 10.1111/j.1365-2672.2009.04173.x. Epub 2009 Mar 19.
6
The complete genome sequence of Lactobacillus plantarum LPL-1, a novel antibacterial probiotic producing class IIa bacteriocin.植物乳杆菌 LPL-1 的全基因组序列，一种新型的产生 IIa 类细菌素的抗菌益生菌。
J Biotechnol. 2018 Jan 20;266:84-88. doi: 10.1016/j.jbiotec.2017.12.006. Epub 2017 Dec 9.
7
Complete genome sequence of bacteriocin-producing Lactobacillus plantarum KLDS1.0391, a probiotic strain with gastrointestinal tract resistance and adhesion to the intestinal epithelial cells.产细菌素的植物乳杆菌KLDS1.0391的全基因组序列，这是一种具有胃肠道抗性且能黏附于肠上皮细胞的益生菌菌株。
Genomics. 2017 Oct;109(5-6):432-437. doi: 10.1016/j.ygeno.2017.06.008. Epub 2017 Jul 1.
8
Plantaricyclin A, a Novel Circular Bacteriocin Produced by Lactobacillus plantarum NI326: Purification, Characterization, and Heterologous Production.植物乳杆菌NI326产生的一种新型环状细菌素——植物环菌素A：纯化、表征及异源表达
Appl Environ Microbiol. 2017 Dec 15;84(1). doi: 10.1128/AEM.01801-17. Print 2018 Jan 1.
9
Plasmid-associated bacteriocin production by a Lactobacillus plantarum strain.植物乳杆菌菌株产生的与质粒相关的细菌素
Biosci Biotechnol Biochem. 1994 Nov;58(11):2084-6. doi: 10.1271/bbb.58.2084.
10
Purification and Characterization of Plantaricin JLA-9: A Novel Bacteriocin against Bacillus spp. Produced by Lactobacillus plantarum JLA-9 from Suan-Tsai, a Traditional Chinese Fermented Cabbage.植物乳杆菌素JLA-9的纯化与特性：一种来自中国传统发酵酸菜酸白菜中植物乳杆菌JLA-9产生的新型抗芽孢杆菌属细菌素。
J Agric Food Chem. 2016 Apr 6;64(13):2754-64. doi: 10.1021/acs.jafc.5b05717. Epub 2016 Mar 24.
引用本文的文献
1
Comparative Genomics of : Insights Into Probiotic Markers in Strains Isolated From the Human Gastrointestinal Tract and Fermented Foods.的比较基因组学：对从人类胃肠道和发酵食品中分离出的菌株中益生菌标志物的见解。
Front Microbiol. 2022 May 18;13:854266. doi: 10.3389/fmicb.2022.854266. eCollection 2022.
2
Crystal structure and site-directed mutagenesis of circular bacteriocin plantacyclin B21AG reveals cationic and aromatic residues important for antimicrobial activity.环型细菌素 plantacyclin B21AG 的晶体结构和定点突变研究揭示了对其抗菌活性重要的阳离子和芳香族残基。
Sci Rep. 2020 Oct 15;10(1):17398. doi: 10.1038/s41598-020-74332-1.
3
Discovery and characterisation of circular bacteriocin plantacyclin B21AG from B21.从B21中发现并鉴定环状细菌素植物环素B21AG。
Heliyon. 2020 Aug 21;6(8):e04715. doi: 10.1016/j.heliyon.2020.e04715. eCollection 2020 Aug.
4
Cloning and functional expression of a food-grade circular bacteriocin, plantacyclin B21AG, in probiotic Lactobacillus plantarum WCFS1.在益生菌植物乳杆菌 WCFS1 中克隆和功能表达食品级环形细菌素 plantacyclin B21AG。
PLoS One. 2020 Aug 12;15(8):e0232806. doi: 10.1371/journal.pone.0232806. eCollection 2020.
5
The functional capacity of plantaricin-producing Lactobacillus plantarum SF9C and S-layer-carrying Lactobacillus brevis SF9B to withstand gastrointestinal transit.植物乳杆菌 SF9C 和携带 S 层的短乳杆菌 SF9B 产生的植物乳杆菌素的功能能力，以承受胃肠道转运。
Microb Cell Fact. 2020 May 19;19(1):106. doi: 10.1186/s12934-020-01365-6.
6
Lactobacilli Isolated From Wild Boar () Antagonize Bacille Calmette-Guerin (BCG) in a Species-Dependent Manner.从野猪中分离出的乳酸杆菌以种属依赖的方式拮抗卡介苗（BCG）。
Front Microbiol. 2019 Jul 30;10:1663. doi: 10.3389/fmicb.2019.01663. eCollection 2019.
7
Complete Genome Sequencing of ZLP001, a Potential Probiotic That Enhances Intestinal Epithelial Barrier Function and Defense Against Pathogens in Pigs.ZLP001的全基因组测序，ZLP001是一种潜在的益生菌，可增强猪的肠道上皮屏障功能并抵御病原体。
Front Physiol. 2018 Nov 27;9:1689. doi: 10.3389/fphys.2018.01689. eCollection 2018.
8
Exploring bioactive peptides from bacterial secretomes using PepSAVI-MS: identification and characterization of Bac-21 from Enterococcus faecalis pPD1.利用 PepSAVI-MS 从细菌分泌物中探索生物活性肽：从粪肠球菌 pPD1 中鉴定和表征 Bac-21。
Microb Biotechnol. 2018 Sep;11(5):943-951. doi: 10.1111/1751-7915.13299. Epub 2018 Jul 16.
9
Fungal Secretome Analysis via PepSAVI-MS: Identification of the Bioactive Peptide KP4 from Ustilago maydis.真菌分泌物通过 PepSAVI-MS 分析：从玉米黑粉菌中鉴定出具有生物活性的肽 KP4。
J Am Soc Mass Spectrom. 2018 May;29(5):859-865. doi: 10.1007/s13361-017-1880-z. Epub 2018 Feb 5.
10
Draft Genome Sequence of Strain A6, a Strong Acid Producer Isolated from a Vietnamese Fermented Sausage (Nem Chua).从越南发酵香肠（Nem Chua）中分离出的强酸产生菌A6菌株的基因组序列草图
Genome Announc. 2017 Oct 12;5(41):e00987-17. doi: 10.1128/genomeA.00987-17.
本文引用的文献
1
De novo assembly of human genomes with massively parallel short read sequencing.利用大规模平行短读测序进行人类基因组从头组装。
Genome Res. 2010 Feb;20(2):265-72. doi: 10.1101/gr.097261.109. Epub 2009 Dec 17.
2
Rfam: updates to the RNA families database.Rfam：RNA家族数据库的更新。
Nucleic Acids Res. 2009 Jan;37(Database issue):D136-40. doi: 10.1093/nar/gkn766. Epub 2008 Oct 25.
3
SOAP: short oligonucleotide alignment program.SOAP：短寡核苷酸比对程序。
Bioinformatics. 2008 Mar 1;24(5):713-4. doi: 10.1093/bioinformatics/btn025. Epub 2008 Jan 28.
4
RNAmmer: consistent and rapid annotation of ribosomal RNA genes.RNAmmer：核糖体RNA基因的一致性快速注释
Nucleic Acids Res. 2007;35(9):3100-8. doi: 10.1093/nar/gkm160. Epub 2007 Apr 22.
5
tRNAscan-SE: a program for improved detection of transfer RNA genes in genomic sequence.tRNAscan-SE：用于改进基因组序列中转运RNA基因检测的程序。
Nucleic Acids Res. 1997 Mar 1;25(5):955-64. doi: 10.1093/nar/25.5.955.
Zotero 插件