生殖基因组学浏览器：面向生殖科学界的综合跨物种工具箱。
The ReproGenomics Viewer: an integrative cross-species toolbox for the reproductive science community.
作者信息
Darde Thomas A, Sallou Olivier, Becker Emmanuelle, Evrard Bertrand, Monjeaud Cyril, Le Bras Yvan, Jégou Bernard, Collin Olivier, Rolland Antoine D, Chalmel Frédéric
机构信息
Inserm U1085-Irset, Université de Rennes 1, F-35042 Rennes, France Institut de Recherche en Informatique et Systèmes Aléatoires (IRISA/INRIA) - GenOuest platform, Université de Rennes 1, F-35042 Rennes, France.
Institut de Recherche en Informatique et Systèmes Aléatoires (IRISA/INRIA) - GenOuest platform, Université de Rennes 1, F-35042 Rennes, France.
出版信息
Nucleic Acids Res. 2015 Jul 1;43(W1):W109-16. doi: 10.1093/nar/gkv345. Epub 2015 Apr 16.
We report the development of the ReproGenomics Viewer (RGV), a multi- and cross-species working environment for the visualization, mining and comparison of published omics data sets for the reproductive science community. The system currently embeds 15 published data sets related to gametogenesis from nine model organisms. Data sets have been curated and conveniently organized into broad categories including biological topics, technologies, species and publications. RGV's modular design for both organisms and genomic tools enables users to upload and compare their data with that from the data sets embedded in the system in a cross-species manner. The RGV is freely available at http://rgv.genouest.org.
我们报告了生殖基因组学浏览器（RGV）的开发情况，它是一个多物种和跨物种的工作环境，用于为生殖科学界可视化、挖掘和比较已发表的组学数据集。该系统目前嵌入了来自9种模式生物的15个与配子发生相关的已发表数据集。数据集已经经过整理，并方便地组织成包括生物学主题、技术、物种和出版物在内的广泛类别。RGV针对生物体和基因组工具的模块化设计，使用户能够以上跨物种的方式上传他们的数据，并与系统中嵌入的数据集中的数据进行比较。RGV可在http://rgv.genouest.org上免费获取。
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