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坦桑尼亚儿童血流感染中氨苄西林耐药和高水平庆大霉素耐药肠球菌的遗传相关性及危险因素分析

Genetic relatedness and risk factor analysis of ampicillin-resistant and high-level gentamicin-resistant enterococci causing bloodstream infections in Tanzanian children.

作者信息

Aamodt Håvard, Mohn Stein Christian, Maselle Samuel, Manji Karim P, Willems Rob, Jureen Roland, Langeland Nina, Blomberg Bjørn

机构信息

Department of Clinical Science, University of Bergen, Bergen, Norway.

Center for Tropical Infectious Diseases, Department of Medicine, Haukeland University Hospital, Bergen, Norway.

出版信息

BMC Infect Dis. 2015 Feb 28;15:107. doi: 10.1186/s12879-015-0845-8.

Abstract

BACKGROUND

While enterococci resistant to multiple antimicrobials are spreading in hospitals worldwide, causing urinary tract, wound and bloodstream infections, there is little published data on these infections from Africa.

METHODS

We assessed the prevalence, susceptibility patterns, clinical outcome and genetic relatedness of enterococcal isolates causing bloodstream infections in children in a tertiary hospital in Tanzania, as part of a prospective cohort study of bloodstream infections among 1828 febrile children admitted consecutively from August 2001 to August 2002.

RESULTS

Enterococcal bacteraemia was identified in 2.1% (39/1828) of admissions, and in 15.3% (39/255) of cases of culture-confirmed bloodstream infections. The case-fatality rate in children with Enterococcus faecalis septicaemia (28.6%, 4/14) was not significantly different from those with Enterococcus faecium septicaemia (6.7%, 1/15, p = 0.12). E. faecium isolates commonly had combined ampicillin-resistance and high-level gentamicin resistance (HLGR), (9/17), while E. faecalis frequently displayed HLGR (6/15), but were ampicillin susceptible. None of the tested enterococcal isolates displayed vancomycin resistance by Etest or PCR for vanA and vanB genes. Multi-locus sequence-typing (MLST) showed that the majority of E. faecium (7/12) belonged to the hospital associated Bayesian Analysis of Population Structure (BAPS) group 3-3. Pulsed-field gel electrophoresis (PFGE) indicated close genetic relationship particularly among E. faecium isolates, but also among E. faecalis isolates. There was also correlation between BAPS group and PFGE results. Risk factors for enterococcal bloodstream infection in univariate analysis were hospital-acquired infection and clinical diagnosis of sepsis with unknown focus. In multivariate analysis, neonates in general were relatively protected from enterococcal infection, while both prematurity and clinical sepsis were risk factors. Malnutrition was a risk factor for enterococcal bloodstream infection among HIV negative children.

CONCLUSION

This is the first study to describe bloodstream infections caused by ampicillin-resistant HLGR E. faecium and HLGR E. faecalis in Tanzania. The isolates of E. faecium and E. faecalis, respectively, showed high degrees of relatedness by genotyping using PFGE. The commonly used treatment regimens at the hospital are insufficient for infections caused by these microbes. The study results call for increased access to microbiological diagnostics to guide rational antibiotic use in Tanzania.

摘要

背景

虽然对多种抗菌药物耐药的肠球菌在全球医院中不断传播,导致尿路感染、伤口感染和血流感染,但来自非洲的这些感染的公开数据很少。

方法

作为对2001年8月至2002年8月连续收治的1828名发热儿童进行的血流感染前瞻性队列研究的一部分,我们评估了坦桑尼亚一家三级医院中引起儿童血流感染的肠球菌分离株的患病率、药敏模式、临床结局和基因相关性。

结果

在1828例入院患者中,2.1%(39/1828)被鉴定为肠球菌血症,在255例血培养确诊的血流感染病例中,15.3%(39/255)为肠球菌血症。粪肠球菌败血症患儿的病死率(28.6%,4/14)与屎肠球菌败血症患儿的病死率(6.7%,1/15,p = 0.12)无显著差异。屎肠球菌分离株通常同时具有氨苄西林耐药和高水平庆大霉素耐药(HLGR)(9/17),而粪肠球菌则经常表现出HLGR(6/15),但对氨苄西林敏感。通过Etest或针对vanA和vanB基因的PCR检测,所有测试的肠球菌分离株均未显示万古霉素耐药。多位点序列分型(MLST)显示,大多数屎肠球菌(7/12)属于医院相关的群体结构贝叶斯分析(BAPS)3-3组。脉冲场凝胶电泳(PFGE)表明,特别是屎肠球菌分离株之间以及粪肠球菌分离株之间存在密切的遗传关系。BAPS组与PFGE结果之间也存在相关性。单因素分析中,肠球菌血流感染的危险因素是医院获得性感染和来源不明的脓毒症临床诊断。多因素分析中,一般新生儿相对不易发生肠球菌感染,而早产和临床脓毒症均为危险因素。营养不良是HIV阴性儿童肠球菌血流感染的危险因素。

结论

这是第一项描述坦桑尼亚氨苄西林耐药HLGR屎肠球菌和HLGR粪肠球菌引起的血流感染的研究。通过PFGE基因分型,屎肠球菌和粪肠球菌分离株分别显示出高度的相关性。医院常用的治疗方案对这些微生物引起的感染不足。研究结果呼吁在坦桑尼亚增加微生物诊断的可及性,以指导合理使用抗生素。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/6148/4350950/8602a04d662d/12879_2015_845_Fig1_HTML.jpg

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