Wilkes Rebecca P, Lee Pei-Yu A, Tsai Yun-Long, Tsai Chuan-Fu, Chang Hsiu-Hui, Chang Hsiao-Fen G, Wang Hwa-Tang T
Biomedical and Diagnostic Sciences, University of Tennessee, Knoxville, TN, United States.
GeneReach USA, Lexington, MA, United States.
J Virol Methods. 2015 Aug;220:35-8. doi: 10.1016/j.jviromet.2015.04.007. Epub 2015 Apr 15.
Canine parvovirus type 2 (CPV-2), including subtypes 2a, 2b and 2c, causes an acute enteric disease in both domestic and wild animals. Rapid and sensitive diagnosis aids effective disease management at points of need (PON). A commercially available, field-deployable and user-friendly system, designed with insulated isothermal PCR (iiPCR) technology, displays excellent sensitivity and specificity for nucleic acid detection. An iiPCR method was developed for on-site detection of all circulating CPV-2 strains. Limit of detection was determined using plasmid DNA. CPV-2a, 2b and 2c strains, a feline panleukopenia virus (FPV) strain, and nine canine pathogens were tested to evaluate assay specificity. Reaction sensitivity and performance were compared with an in-house real-time PCR using serial dilutions of a CPV-2b strain and 100 canine fecal clinical samples collected from 2010 to 2014, respectively. The 95% limit of detection of the iiPCR method was 13 copies of standard DNA and detection limits for CPV-2b DNA were equivalent for iiPCR and real-time PCR. The iiPCR reaction detected CPV-2a, 2b and 2c and FPV. Non-targeted pathogens were not detected. Test results of real-time PCR and iiPCR from 99 fecal samples agreed with each other, while one real-time PCR-positive sample tested negative by iiPCR. Therefore, excellent agreement (k = 0.98) with sensitivity of 98.41% and specificity of 100% in detecting CPV-2 in feces was found between the two methods. In conclusion, the iiPCR system has potential to serve as a useful tool for rapid and accurate PON, molecular detection of CPV-2.
犬细小病毒2型(CPV-2),包括2a、2b和2c亚型,可导致家养动物和野生动物患急性肠道疾病。快速灵敏的诊断有助于在需求点(PON)进行有效的疾病管理。一种采用隔热等温PCR(iiPCR)技术设计的商用、可现场部署且用户友好的系统,在核酸检测方面表现出出色的灵敏度和特异性。开发了一种iiPCR方法用于现场检测所有流行的CPV-2毒株。使用质粒DNA确定检测限。对CPV-2a、2b和2c毒株、一株猫泛白细胞减少症病毒(FPV)毒株以及九种犬类病原体进行检测以评估检测方法的特异性。分别使用CPV-2b毒株的系列稀释液和2010年至2014年收集的100份犬粪便临床样本,将反应灵敏度和性能与内部实时PCR进行比较。iiPCR方法的95%检测限为13份标准DNA拷贝,iiPCR和实时PCR对CPV-2b DNA的检测限相当。iiPCR反应检测到了CPV-2a、2b和2c以及FPV。未检测到非目标病原体。99份粪便样本的实时PCR和iiPCR检测结果相互一致,但有一份实时PCR阳性样本经iiPCR检测为阴性。因此,两种方法在检测粪便中CPV-2时具有极佳的一致性(k = 0.98),灵敏度为98.41%,特异性为100%。总之,iiPCR系统有潜力作为一种有用的工具,用于在需求点快速准确地进行CPV-2的分子检测。