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牛过氧化物氧还蛋白III F190L的改进级联结构揭示了环-环相互作用的细节和一种新的构象状态。

Improved Catenated Structures of Bovine Peroxiredoxin III F190L Reveal Details of Ring-Ring Interactions and a Novel Conformational State.

作者信息

Cao Zhenbo, McGow Donna P, Shepherd Colin, Lindsay J Gordon

机构信息

From the Institute of Molecular, Cell and Systems Biology, CMVLS, University of Glasgow, Glasgow, United Kingdom.

出版信息

PLoS One. 2015 Apr 23;10(4):e0123303. doi: 10.1371/journal.pone.0123303. eCollection 2015.

Abstract

Mitochondrial 2-cys peroxiredoxin III (PrxIII) is a key player in antioxidant defence reducing locally-generated H2O2 to H2O. A Phe to Leu (F190L) mutation in the C-terminal α-helix of PrxIII, mimicking that found in some bacteria and parasites, increases its resistance to hyperoxidation but has no obvious influence on peroxidase activity. Here we report on the oxidized and reduced crystal structures of bovine PrxIII F190L at 2.4 Å and 2.2 Å, respectively. Both structures exist as two-ring catenanes with their dodecameric rings inclined at 55o to each other, similar to that previously reported for PrxIII C168S. The new higher-resolution structures reveal details of the complex network of H-bonds stabilising the inter-toroid contacts. In addition, Arg123, the key conserved residue, that normally interacts with the catalytic cys (Cp, cys 47) is found in a distinct conformation extending away from the Cp while the characteristic Arg-Glu-Arg network, underpinning the active-site geometry also displays a distinctive arrangement, not observed previously. This novel active-site organisation may provide new insights into the dynamics of the large-scale conformational changes occurring between oxidized and reduced states.

摘要

线粒体2-半胱氨酸过氧化物酶III(PrxIII)是抗氧化防御中的关键因子,可将局部产生的过氧化氢还原为水。PrxIII C端α-螺旋中的苯丙氨酸突变为亮氨酸(F190L),模拟了在一些细菌和寄生虫中发现的突变,增加了其对过度氧化的抗性,但对过氧化物酶活性没有明显影响。在此,我们分别报道了牛PrxIII F190L在2.4 Å和2.2 Å分辨率下的氧化态和还原态晶体结构。这两种结构均以双环连环体形式存在,其十二聚体环彼此倾斜55°,类似于先前报道的PrxIII C168S的结构。新的高分辨率结构揭示了稳定环间接触的氢键复杂网络的细节。此外,关键保守残基精氨酸123通常与催化性半胱氨酸(Cp,半胱氨酸47)相互作用,现在发现其处于远离Cp的独特构象,而支撑活性位点几何结构的特征性精氨酸-谷氨酸-精氨酸网络也呈现出一种以前未观察到的独特排列。这种新颖的活性位点组织可能为氧化态和还原态之间发生的大规模构象变化的动力学提供新的见解。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/697e/4407889/e6039f5f519c/pone.0123303.g001.jpg

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