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细胞RNA中G-四链体的靶向检测

Targeted Detection of G-Quadruplexes in Cellular RNAs.

作者信息

Kwok Chun Kit, Balasubramanian Shankar

机构信息

The University of Cambridge, Department of Chemistry, Lensfield Road, Cambridge, CB2 1EW (UK).

出版信息

Angew Chem Int Ed Engl. 2015 Jun 1;54(23):6751-4. doi: 10.1002/anie.201500891. Epub 2015 Apr 23.

DOI:10.1002/anie.201500891
PMID:25907625
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC4510783/
Abstract

The G-quadruplex (G4) is a non-canonical nucleic acid structure which regulates important cellular processes. RNA G4s have recently been shown to exist in human cells and be biologically significant. Described herein is a new approach to detect and map RNA G4s in cellular transcripts. This method exploits the specific control of RNA G4-cation and RNA G4-ligand interactions during reverse transcription, by using a selective reverse transcriptase to monitor RNA G4-mediated reverse transcriptase stalling (RTS) events. Importantly, a ligation-amplification strategy is coupled with RTS, and enables detection and mapping of G4s in important, low-abundance cellular RNAs. Strong evidence is provided for G4 formation in full-length cellular human telomerase RNA, offering important insights into its cellular function.

摘要

G-四链体(G4)是一种非经典核酸结构,可调节重要的细胞过程。最近研究表明,RNA G4存在于人类细胞中且具有生物学意义。本文描述了一种检测和定位细胞转录本中RNA G4的新方法。该方法利用逆转录过程中RNA G4-阳离子和RNA G4-配体相互作用的特异性控制,通过使用选择性逆转录酶监测RNA G4介导的逆转录酶停滞(RTS)事件。重要的是,连接扩增策略与RTS相结合,能够检测和定位重要的低丰度细胞RNA中的G4。为全长细胞人端粒酶RNA中G4的形成提供了有力证据,为其细胞功能提供了重要见解。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/72de/4510783/f4d819eed0e5/anie0054-6751-f5.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/72de/4510783/216eff61d54c/anie0054-6751-f1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/72de/4510783/677f64dd5dc9/anie0054-6751-f2.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/72de/4510783/8f3b5606a6a6/anie0054-6751-f3.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/72de/4510783/f5e2f2dde644/anie0054-6751-f4.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/72de/4510783/f4d819eed0e5/anie0054-6751-f5.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/72de/4510783/216eff61d54c/anie0054-6751-f1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/72de/4510783/677f64dd5dc9/anie0054-6751-f2.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/72de/4510783/8f3b5606a6a6/anie0054-6751-f3.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/72de/4510783/f5e2f2dde644/anie0054-6751-f4.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/72de/4510783/f4d819eed0e5/anie0054-6751-f5.jpg

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Angew Chem Int Ed Engl. 2015 Jan 12;54(3):910-3. doi: 10.1002/anie.201408113. Epub 2014 Nov 24.
3
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Fundam Res. 2021 Dec 30;2(1):2-13. doi: 10.1016/j.fmre.2021.12.007. eCollection 2022 Jan.
4
Competitive Microarray Screening Reveals Functional Ligands for the DHX15 RNA G-Quadruplex.竞争性微阵列筛选揭示了DHX15 RNA G-四链体的功能性配体。
ACS Med Chem Lett. 2024 May 2;15(6):814-821. doi: 10.1021/acsmedchemlett.3c00574. eCollection 2024 Jun 13.
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Angew Chem Weinheim Bergstr Ger. 2021 Aug 9;133(33):18292-18299. doi: 10.1002/ange.202104179. Epub 2021 Jul 9.
6
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9
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10
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Nucleic Acids Res. 2014 Jan;42(2):860-9. doi: 10.1093/nar/gkt957. Epub 2013 Oct 24.