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印记基因表达发育调控中的染色质机制。

Chromatin mechanisms in the developmental control of imprinted gene expression.

作者信息

Sanli Ildem, Feil Robert

机构信息

Institute of Molecular Genetics (IGMM), UMR-5535, CNRS, University of Montpellier, 1919 route de Mende, 34293 Montpellier, France.

Institute of Molecular Genetics (IGMM), UMR-5535, CNRS, University of Montpellier, 1919 route de Mende, 34293 Montpellier, France.

出版信息

Int J Biochem Cell Biol. 2015 Oct;67:139-47. doi: 10.1016/j.biocel.2015.04.004. Epub 2015 Apr 20.

DOI:10.1016/j.biocel.2015.04.004
PMID:25908531
Abstract

Hundreds of protein-coding genes and regulatory non-coding RNAs (ncRNAs) are subject to genomic imprinting. The mono-allelic DNA methylation marks that control imprinted gene expression are somatically maintained throughout development, and this process is linked to specific chromatin features. Yet, at many imprinted genes, the mono-allelic expression is lineage or tissue-specific. Recent studies provide mechanistic insights into the developmentally-restricted action of the 'imprinting control regions' (ICRs). At several imprinted domains, the ICR expresses a long ncRNA that mediates chromatin repression in cis (and probably in trans as well). ICRs at other imprinted domains mediate higher-order chromatin structuration that enhances, or prevents, transcription of close-by genes. Here, we present how chromatin and ncRNAs contribute to developmental control of imprinted gene expression and discuss implications for disease. This article is part of a Directed Issue entitled: Epigenetics dynamics in development and disease.

摘要

数百个蛋白质编码基因和调控性非编码RNA(ncRNA)受到基因组印记的影响。控制印记基因表达的单等位基因DNA甲基化标记在整个发育过程中体细胞内保持稳定,并且这一过程与特定的染色质特征相关。然而,在许多印记基因中,单等位基因表达具有谱系或组织特异性。最近的研究为“印记控制区”(ICR)在发育受限的作用机制提供了见解。在几个印记结构域中,ICR表达一种长链ncRNA,其在顺式(可能也在反式)中介导染色质抑制。其他印记结构域的ICR介导高阶染色质结构形成,增强或阻止附近基因的转录。在这里,我们阐述染色质和ncRNA如何对印记基因表达的发育控制做出贡献,并讨论其对疾病的影响。本文是名为“发育和疾病中的表观遗传学动态”的定向专题的一部分。

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