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PDBest:一个用于操作和优化蛋白质结构的用户友好平台。

PDBest: a user-friendly platform for manipulating and enhancing protein structures.

作者信息

Gonçalves Wellisson R S, Gonçalves-Almeida Valdete M, Arruda Aleksander L, Meira Wagner, da Silveira Carlos H, Pires Douglas E V, de Melo-Minardi Raquel C

机构信息

Department of Computer Science, Universidade Federal de Minas Gerais, Brazil.

Advanced Campus at Itabira, Universidade Federal de Itajubá, Brazil and.

出版信息

Bioinformatics. 2015 Sep 1;31(17):2894-6. doi: 10.1093/bioinformatics/btv223. Epub 2015 Apr 24.

Abstract

UNLABELLED

PDBest (PDB Enhanced Structures Toolkit) is a user-friendly, freely available platform for acquiring, manipulating and normalizing protein structures in a high-throughput and seamless fashion. With an intuitive graphical interface it allows users with no programming background to download and manipulate their files. The platform also exports protocols, enabling users to easily share PDB searching and filtering criteria, enhancing analysis reproducibility.

AVAILABILITY AND IMPLEMENTATION

PDBest installation packages are freely available for several platforms at http://www.pdbest.dcc.ufmg.br

CONTACT

wellisson@dcc.ufmg.br, dpires@dcc.ufmg.br, raquelcm@dcc.ufmg.br

SUPPLEMENTARY INFORMATION

Supplementary data are available at Bioinformatics online.

摘要

未标注

PDBest(蛋白质数据银行增强结构工具包)是一个用户友好的免费平台,用于以高通量和无缝方式获取、操作和规范化蛋白质结构。它具有直观的图形界面,允许没有编程背景的用户下载和操作文件。该平台还导出协议,使用户能够轻松共享蛋白质数据银行搜索和筛选标准,提高分析的可重复性。

可用性与实现

PDBest安装包可在http://www.pdbest.dcc.ufmg.br免费获取,适用于多个平台。

联系方式

wellisson@dcc.ufmg.brdpires@dcc.ufmg.brraquelcm@dcc.ufmg.br

补充信息

补充数据可在《生物信息学》在线获取。

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