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甲基孢囊菌中的短LOV蛋白揭示了对LOV结构域光循环机制的见解。

Short LOV Proteins in Methylocystis Reveal Insight into LOV Domain Photocycle Mechanisms.

作者信息

El-Arab Kaley K, Pudasaini Ashutosh, Zoltowski Brian D

机构信息

Department of Chemistry, Center for Drug Discovery, Design and Delivery, Southern Methodist University, Dallas, Texas, United States of America.

出版信息

PLoS One. 2015 May 1;10(5):e0124874. doi: 10.1371/journal.pone.0124874. eCollection 2015.

Abstract

Light Oxygen Voltage (LOV) proteins are widely used in optogenetic devices, however universal signal transduction pathways and photocycle mechanisms remain elusive. In particular, short-LOV (sLOV) proteins have been discovered in bacteria and fungi, containing only the photoresponsive LOV element without any obvious signal transduction domains. These sLOV proteins may be ideal models for LOV domain function due to their ease of study as full-length proteins. Unfortunately, characterization of such proteins remains limited to select systems. Herein, we identify a family of bacterial sLOV proteins present in Methylocystis. Sequence analysis of Methylocystis LOV proteins (McLOV) demonstrates conservation with sLOV proteins from fungal systems that employ competitive dimerization as a signaling mechanism. Cloning and characterization of McLOV proteins confirms functional dimer formation and reveal unexpected photocycle mechanisms. Specifically, some McLOV photocycles are insensitive to external bases such as imidazole, in contrast to previously characterized LOV proteins. Mutational analysis identifies a key residue that imparts insensitivity to imidazole in two McLOV homologs and affects adduct decay by two orders of magnitude. The resultant data identifies a new family of LOV proteins that indicate a universal photocycle mechanism may not be present in LOV proteins.

摘要

光氧电压(LOV)蛋白广泛应用于光遗传学装置中,然而其通用的信号转导途径和光循环机制仍不清楚。特别是,已在细菌和真菌中发现了短LOV(sLOV)蛋白,它们仅包含光响应性LOV元件,没有任何明显的信号转导结构域。由于这些sLOV蛋白作为全长蛋白易于研究,它们可能是研究LOV结构域功能的理想模型。不幸的是,此类蛋白的表征仍局限于特定系统。在此,我们鉴定出甲基孢囊菌中存在的一类细菌sLOV蛋白。甲基孢囊菌LOV蛋白(McLOV)的序列分析表明,它与采用竞争性二聚化作为信号传导机制的真菌系统中的sLOV蛋白具有保守性。McLOV蛋白的克隆和表征证实了功能性二聚体的形成,并揭示了意想不到的光循环机制。具体而言,与先前表征的LOV蛋白相比,一些McLOV光循环对咪唑等外部碱基不敏感。突变分析确定了一个关键残基,该残基使两个McLOV同源物对咪唑不敏感,并使加合物衰减降低两个数量级。所得数据鉴定出一个新的LOV蛋白家族,表明LOV蛋白中可能不存在通用的光循环机制。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/1ca1/4416707/d6b12ff41d95/pone.0124874.g001.jpg

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