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元特征性微小RNA在肾细胞癌中的预后价值:一项整合的微小RNA表达谱分析

Prognostic value of meta-signature miRNAs in renal cell carcinoma: an integrated miRNA expression profiling analysis.

作者信息

Tang Kun, Xu Hua

机构信息

1] Department of Urology, Tongji Hospital, Tongji Medical College, Huazhong University of Science and Technology, Wuhan, China [2] Institute of Urology, Tongji Hospital, Tongji Medical College, Huazhong University of Science and Technology, Wuhan, China.

出版信息

Sci Rep. 2015 May 14;5:10272. doi: 10.1038/srep10272.

DOI:10.1038/srep10272
PMID:25974855
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC4431463/
Abstract

To identify a robust panel of microRNA (miRNA) signatures that can distinguish renal cell carcinoma (RCC) from normal kidney using miRNA expression levels. We performed a comprehensive meta-analysis of 29 published studies that compared the miRNA expression profiles of RCC tissues and adjacent normal tissues (NT) to determine candidate miRNAs as prognostic biomarkers for RCC. Using vote-counting strategy and robust rank aggregation method, we identified a statistically significant miRNA meta-signature of two upregulated (miR-21, miR-210) and three downregulated (miR-141, miR-200c and miR-429) miRNAs. X-tile plot was used to generate the optimum cut-off point for the 15 different deregulated miRNAs and Kaplan-Meier method was used to calculate CSS. In a cohort of 45 patients, the high expression of miR-21 (HR: 5.46, 95%CI: 2.02-53.39) and miR-210 (HR: 6.85, 95%CI: 2.13-43.36), the low expression of miR-141 (HR: 0.16, 95%CI: 0.004-0.18), miR-200c (HR: 0.08, 95%CI: 0.01-0.43) and miR-429 (HR: 0.18, 95%CI: 0.02-0.50) were associated with poor cancer-specific survival (CSS) following RCC resection. We also constructed a five-miRNAs-based classifier as a reliable prognostic and predictive tool for CSS in patients with RCC, especially in clear cell RCC (ccRCC) (HR: 5.46, 95% CI: 1.51-19.66). This method might facilitate patient counselling and individualise management of RCC.

摘要

利用微小RNA(miRNA)表达水平,确定一组能区分肾细胞癌(RCC)与正常肾组织的强大miRNA特征。我们对29项已发表研究进行了全面的荟萃分析,这些研究比较了RCC组织和相邻正常组织(NT)的miRNA表达谱,以确定作为RCC预后生物标志物的候选miRNA。采用投票计数策略和稳健秩聚合方法,我们确定了一个具有统计学意义的miRNA元特征,包括两个上调的(miR-21、miR-210)和三个下调的(miR-141、miR-200c和miR-429)miRNA。使用X-tile图生成15种不同失调miRNA的最佳截断点,并使用Kaplan-Meier方法计算癌症特异性生存率(CSS)。在一组45例患者中,miR-21(HR:5.46,95%CI:2.02-53.39)和miR-210(HR:6.85,95%CI:2.13-43.36)的高表达,miR-141(HR:0.16,95%CI:0.004-0.18)、miR-200c(HR:0.08,95%CI:0.01-0.43)和miR-429(HR:0.18,95%CI:0.02-0.50)的低表达与RCC切除术后不良的癌症特异性生存率(CSS)相关。我们还构建了一个基于5种miRNA的分类器,作为RCC患者CSS的可靠预后和预测工具,尤其是在透明细胞RCC(ccRCC)中(HR:5.46,95%CI:1.51-19.66)。该方法可能有助于患者咨询和RCC的个体化管理。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/abb2/4431463/e1db66f34c93/srep10272-f3.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/abb2/4431463/304c1e48bd0c/srep10272-f1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/abb2/4431463/da454aa3b878/srep10272-f2.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/abb2/4431463/e1db66f34c93/srep10272-f3.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/abb2/4431463/304c1e48bd0c/srep10272-f1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/abb2/4431463/da454aa3b878/srep10272-f2.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/abb2/4431463/e1db66f34c93/srep10272-f3.jpg

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