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来自印度檀香(Santalum album)的新型倍半萜合酶的功能表征

Functional Characterization of Novel Sesquiterpene Synthases from Indian Sandalwood, Santalum album.

作者信息

Srivastava Prabhakar Lal, Daramwar Pankaj P, Krithika Ramakrishnan, Pandreka Avinash, Shankar S Shiva, Thulasiram Hirekodathakallu V

机构信息

Chemical Biology Unit, Division of Organic Chemistry, CSIR- National Chemical Laboratory, Dr. Homi Bhabha Road, Pune. 411008.

1] Chemical Biology Unit, Division of Organic Chemistry, CSIR- National Chemical Laboratory, Dr. Homi Bhabha Road, Pune. 411008 [2] CSIR-Institute of Genomics and Integrative Biology, Mall Road, New Delhi. 110007.

出版信息

Sci Rep. 2015 May 15;5:10095. doi: 10.1038/srep10095.

Abstract

Indian Sandalwood, Santalum album L. is highly valued for its fragrant heartwood oil and is dominated by a blend of sesquiterpenes. Sesquiterpenes are formed through cyclization of farnesyl diphosphate (FPP), catalyzed by metal dependent terpene cyclases. This report describes the cloning and functional characterization of five genes, which encode two sesquisabinene synthases (SaSQS1, SaSQS2), bisabolene synthase (SaBS), santalene synthase (SaSS) and farnesyl diphosphate synthase (SaFDS) using the transcriptome sequencing of S. album. Using Illumina next generation sequencing, 33.32 million high quality raw reads were generated, which were assembled into 84,094 unigenes with an average length of 494.17 bp. Based on the transcriptome sequencing, five sesquiterpene synthases SaFDS, SaSQS1, SaSQS2, SaBS and SaSS involved in the biosynthesis of FPP, sesquisabinene, β-bisabolene and santalenes, respectively, were cloned and functionally characterized. Novel sesquiterpene synthases (SaSQS1 and SaSQS2) were characterized as isoforms of sesquisabinene synthase with varying kinetic parameters and expression levels. Furthermore, the feasibility of microbial production of sesquisabinene from both the unigenes, SaSQS1 and SaSQS2 in non-optimized bacterial cell for the preparative scale production of sesquisabinene has been demonstrated. These results may pave the way for in vivo production of sandalwood sesquiterpenes in genetically tractable heterologous systems.

摘要

印度檀香(Santalum album L.)因其芬芳的檀香油而备受珍视,其主要成分是倍半萜烯的混合物。倍半萜烯是由法尼基二磷酸(FPP)环化形成的,由金属依赖性萜烯环化酶催化。本报告描述了五个基因的克隆和功能表征,这些基因使用檀香的转录组测序编码两种倍半萨宾烯合酶(SaSQS1、SaSQS2)、没药烯合酶(SaBS)、檀香烯合酶(SaSS)和法尼基二磷酸合酶(SaFDS)。使用Illumina下一代测序技术,产生了3332万个高质量原始读数,这些读数被组装成84094个单基因,平均长度为494.17 bp。基于转录组测序,分别参与FPP、倍半萨宾烯、β-没药烯和檀香烯生物合成的五种倍半萜烯合酶SaFDS、SaSQS1、SaSQS2、SaBS和SaSS被克隆并进行了功能表征。新型倍半萜烯合酶(SaSQS1和SaSQS2)被表征为具有不同动力学参数和表达水平的倍半萨宾烯合酶同工型。此外,已经证明了在非优化细菌细胞中从单基因SaSQS1和SaSQS2微生物生产倍半萨宾烯用于倍半萨宾烯的制备规模生产的可行性。这些结果可能为在遗传易处理的异源系统中体内生产檀香倍半萜烯铺平道路。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/35cc/4432371/f2e1227a4ab1/srep10095-f1.jpg

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