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新种月见草类芽孢杆菌和新种萱草类芽孢杆菌,从草本植物根部分离得到。

Paenibacillus oenotherae sp. nov. and Paenibacillus hemerocallicola sp. nov., isolated from the roots of herbaceous plants.

作者信息

Kim Tae-Su, Han Ji-Hye, Joung Yochan, Kim Seung Bum

机构信息

Department of Microbiology and Molecular Biology, College of Bioscience and Biotechnology, Chungnam National University, 220 Gung-Dong, Yuseong, Daejeon 305-764, Republic of Korea.

出版信息

Int J Syst Evol Microbiol. 2015 Aug;65(8):2717-2725. doi: 10.1099/ijs.0.000329. Epub 2015 May 14.

Abstract

Two Gram-staining-positive, aerobic, endospore-forming, motile bacteria, strains DT7-4T and DLE-12T, were isolated from roots of evening primrose (Oenothera biennis) and day lily (Hemerocallis fulva), respectively, and subjected to taxonomic characterization. Analysis of 16S rRNA gene sequences indicated that the two strains fell into two distinct phylogenetic clusters belonging to the genus Paenibacillus. Strain DT7-4T was most closely related to Paenibacillus phyllosphaerae PALXIL04T and Paenibacillus taihuensis THMBG22T, with 96.3% 16S rRNA gene sequence similarity to each, and strain DLE-12T was most closely related to Paenibacillus ginsengarvi Gsoil 139T and Paenibacillus hodogayensis SGT, with 96.6 and 93.3% sequence similarity, respectively. Both isolates contained anteiso-C15 : 0 as the dominant fatty acid, meso-diaminopimelic acid as the diagnostic diamino acid in the cell-wall peptidoglycan and MK-7 as the respiratory menaquinone. The cellular polar lipids were composed of diphosphatidylglycerol, phosphatidylethanolamine, phosphatidylglycerol and unidentified polar lipids. The DNA G+C contents of strains DT7-4T and DLE-12T were 50.1 ± 0.7 and 55.2 ± 0.5 mol%, respectively. The chemotaxonomic properties of both isolates were typical of members of the genus Paenibacillus. However, our biochemical and phylogenetic analyses distinguished each isolate from related species. Based on our polyphasic taxonomic analysis, strains DT7-4T and DLE-12T should be recognized as representatives of novel species of Paenibacillus, for which the names Paenibacillus oenotherae sp. nov. (type strain DT7-4T = KCTC 33186T = JCM 19573T) and Paenibacillus hemerocallicola sp. nov. (type strain DLE-12T = KCTC 33185T = JCM 19572T) are proposed.

摘要

从月见草(月见草属二年生植物)和黄花菜(萱草属)的根部分别分离出两株革兰氏染色阳性、需氧、形成芽孢、具运动性的细菌,菌株DT7-4T和DLE-12T,并对其进行了分类学鉴定。16S rRNA基因序列分析表明,这两株菌属于芽孢杆菌属的两个不同系统发育簇。菌株DT7-4T与叶鞘芽孢杆菌PALXIL04T和太湖芽孢杆菌THMBG22T关系最为密切,16S rRNA基因序列相似性均为96.3%;菌株DLE-12T与人参芽孢杆菌Gsoil 139T和保土芽孢杆菌SGT关系最为密切,序列相似性分别为96.6%和93.3%。两株分离菌均以anteiso-C15 : 0作为主要脂肪酸,以内消旋二氨基庚二酸作为细胞壁肽聚糖中的特征性二氨基酸,以MK-7作为呼吸醌。细胞极性脂质由双磷脂酰甘油、磷脂酰乙醇胺、磷脂酰甘油和未鉴定的极性脂质组成。菌株DT7-4T和DLE-12T的DNA G+C含量分别为50.1 ± 0.7和55.2 ± 0.5 mol%。两株分离菌的化学分类学特性均为芽孢杆菌属成员的典型特征。然而,我们的生化和系统发育分析将每株分离菌与相关物种区分开来。基于我们的多相分类分析,菌株DT7-4T和DLE-12T应被视为芽孢杆菌属新物种的代表,为此提出了新物种月见草芽孢杆菌(Paenibacillus oenotherae sp. nov.)(模式菌株DT7-4T = KCTC 33186T = JCM 19573T)和萱草芽孢杆菌(Paenibacillus hemerocallicola sp. nov.)(模式菌株DLE-12T = KCTC 33185T = JCM 19572T)的名称。

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