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从山区土壤中分离出的新种蒙塔尼解淀粉芽孢杆菌。

Paenibacillus montanisoli sp. nov., isolated from mountain area soil.

作者信息

Wu Minghan, Zong Yuanyuan, Guo Wei, Wang Gejiao, Li Mingshun

机构信息

State Key Laboratory of Agricultural Microbiology, College of Life Science and Technology, Huazhong Agricultural University, Wuhan, Hubei 430070, PR China.

出版信息

Int J Syst Evol Microbiol. 2018 Nov;68(11):3569-3575. doi: 10.1099/ijsem.0.003036. Epub 2018 Oct 11.

Abstract

A Gram-stain-negative, aerobic, motile, endospore-forming and rod-shaped bacterium, designated RA17, was isolated from Dafan, Hubei Province, China. Based on 16S rRNA gene sequence similarity comparisons, strain RA17 was most closely related to Paenibacillus taihuensis THMBG22 (97.4 %), Paenibacillus rhizoryzae ACCC 1ZS3-5 (97.4 %) and Paenibacillus sacheonensis DSM SY01 (96.5 %). Analysis of the rpoB gene also indicated that RA17 had the highest similarity to P. rhizoryzae ACCC 1ZS3-5 (92.3 %), P. taihuensis THMBG22 (88.4 %) and P. sacheonensis DSM SY01 (85.5 %). The DNA-DNA hybridization values between strain RA17 and the two type strains, P. taihuensis THMBG22 and P. rhizoryzae ACCC 1ZS3-5, were 36.8 and 22.9 %, respectively. Its genome size was 6.17 Mb, comprising 5677 predicted genes with a DNA G+C content of 52.82 mol %. The major cellular fatty acids were anteiso-C15 : 0, iso-C15 : 0 and iso-C16 : 0. The polar lipids were diphosphatidylglycerol, phosphatidylethanolamine, phosphatidylglycerol, phosphoglycolipid, four aminophospholipids, an unidentified phospholipid and an unidentified polar lipid. The major quinone was menaquinone 7. The diagnostic diamino acid of the cell wall was meso-diaminopimelic acid. The low DNA-DNA hybridization values, physiological and biochemical differences, such as growth at 4 °C, acid production from inositol, lack of α-chymotrypsin activity, no casein hydrolysis, and negative for acid production from d-fructose, melibiose and sucrose, could distinguish strain RA17 from its closely related species. Consequently, strain RA17 represents a novel species of the genus Paenibacillus, for which the name Paenibacillusmontanisoli sp. nov. is proposed, with RA17 (=KCTC 33894=CCTCC AB 2017053) as the type strain.

摘要

从中国湖北省大畈分离出一株革兰氏染色阴性、需氧、运动、产芽孢的杆状细菌,命名为RA17。基于16S rRNA基因序列相似性比较,菌株RA17与太湖类芽孢杆菌THMBG22(97.4%)、水稻类芽孢杆菌ACCC 1ZS3-5(97.4%)和 Sacheon类芽孢杆菌DSM SY01(96.5%)关系最为密切。rpoB基因分析也表明,RA17与水稻类芽孢杆菌ACCC 1ZS3-5(92.3%)、太湖类芽孢杆菌THMBG22(88.4%)和 Sacheon类芽孢杆菌DSM SY01(85.5%)具有最高的相似性。菌株RA17与两株模式菌株太湖类芽孢杆菌THMBG22和水稻类芽孢杆菌ACCC 1ZS3-5之间的DNA-DNA杂交值分别为36.8%和22.9%。其基因组大小为6.17 Mb,包含5677个预测基因,DNA G+C含量为52.82 mol%。主要细胞脂肪酸为anteiso-C15 : 0、iso-C15 : 0和iso-C16 : 0。极性脂为双磷脂酰甘油、磷脂酰乙醇胺、磷脂酰甘油、磷酸糖脂、四种氨基磷脂、一种未鉴定的磷脂和一种未鉴定的极性脂。主要醌为甲基萘醌7。细胞壁的诊断性二氨基酸为内消旋二氨基庚二酸。低DNA-DNA杂交值、生理生化差异,如4℃生长、肌醇产酸、缺乏α-糜蛋白酶活性、不水解酪蛋白以及对d-果糖、蜜二糖和蔗糖产酸呈阴性,可将菌株RA17与其近缘种区分开来。因此,菌株RA17代表类芽孢杆菌属的一个新种,为此提出名为Paenibacillusmontanisoli sp. nov.的新名称,以RA17(=KCTC 33894=CCTCC AB 2017053)作为模式菌株。

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