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通过体内药理学实验对有偏差的GPCR信号传导机制进行信息反卷积。

Informatic deconvolution of biased GPCR signaling mechanisms from in vivo pharmacological experimentation.

作者信息

Maudsley Stuart, Martin Bronwen, Janssens Jonathan, Etienne Harmonie, Jushaj Areta, van Gastel Jaana, Willemsen Ann, Chen Hongyu, Gesty-Palmer Diane, Luttrell Louis M

机构信息

Translational Neurobiology Group, VIB Department of Molecular Genetics, University of Antwerp, Belgium; Laboratory of Neurogenetics, Institute Born Bunge, University of Antwerp, Antwerp, Belgium.

Metabolism Unit, National Institute on Aging, National Institutes of Health, Baltimore, MD 21224, USA.

出版信息

Methods. 2016 Jan 1;92:51-63. doi: 10.1016/j.ymeth.2015.05.013. Epub 2015 May 16.

Abstract

Ligands possessing different physico-chemical structures productively interact with G protein-coupled receptors generating distinct downstream signaling events due to their abilities to activate/select idiosyncratic receptor entities ('receptorsomes') from the full spectrum of potential receptor partners. We have employed multiple novel informatic approaches to identify and characterize the in vivo transcriptomic signature of an arrestin-signaling biased ligand, [D-Trp(12),Tyr(34)]-bPTH(7-34), acting at the parathyroid hormone type 1 receptor (PTH1R), across six different murine tissues after chronic drug exposure. We are able to demonstrate that [D-Trp(12),Tyr(34)]-bPTH(7-34) elicits a distinctive arrestin-signaling focused transcriptomic response that is more coherently regulated, in an arrestin signaling-dependent manner, across more tissues than that of the pluripotent endogenous PTH1R ligand, hPTH(1-34). This arrestin-focused response signature is strongly linked with the transcriptional regulation of cell growth and development. Our informatic deconvolution of a conserved arrestin-dependent transcriptomic signature from wild type mice demonstrates a conceptual framework within which the in vivo outcomes of biased receptor signaling may be further investigated or predicted.

摘要

由于能够从所有潜在受体伙伴中激活/选择特异的受体实体(“受体体”),具有不同物理化学结构的配体与G蛋白偶联受体有效相互作用,产生不同的下游信号事件。我们采用了多种新颖的信息学方法,以鉴定和表征在慢性药物暴露后,作用于甲状旁腺激素1型受体(PTH1R)的一种偏向β抑制蛋白信号的配体[D-Trp(12),Tyr(34)]-bPTH(7-34)在六种不同小鼠组织中的体内转录组特征。我们能够证明,[D-Trp(12),Tyr(34)]-bPTH(7-34)引发了一种独特的、聚焦于β抑制蛋白信号的转录组反应,该反应以β抑制蛋白信号依赖的方式,在更多组织中比多能内源性PTH1R配体hPTH(1-34)受到更协调的调控。这种聚焦于β抑制蛋白的反应特征与细胞生长和发育的转录调控密切相关。我们对野生型小鼠中保守的β抑制蛋白依赖转录组特征进行的信息学反卷积分析,展示了一个概念框架,在这个框架内,可以进一步研究或预测偏向性受体信号传导的体内结果。

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