Buitenhuis Bart, Poulsen Nina A, Larsen Lotte B, Sehested Jakob
Aarhus University, Center for Quantitative Genetics and Genomics, Department of Molecular Biology and Genetics, Blichers Allé 20, P.O. Box 50, DK-8830, Tjele, Denmark.
Aarhus University, Department of Food Science, Blichers Allé 20, P.O. Box 50, DK-8830, Tjele, Denmark.
BMC Genet. 2015 May 21;16:52. doi: 10.1186/s12863-015-0209-9.
Bovine milk provides important minerals, essential for human nutrition and dairy product quality. For changing the mineral composition of the milk to improve dietary needs in human nutrition and technological properties of milk, a thorough understanding of the genetics underlying milk mineral contents is important. Therefore the aim of this study was to 1) estimate the genetic parameters for individual minerals in Danish Holstein (DH) (n=371) and Danish Jersey (DJ) (n=321) milk, and 2) detect genomic regions associated with mineral content in the milk using a genome-wide association study (GWAS) approach.
For DH, high heritabilities were found for Ca (0.72), Zn (0.49), and P (0.46), while for DJ, high heritabilities were found for Ca (0.63), Zn (0.57), and Mg (0.57). Furthermore, intermediate heritabilities were found for Cu in DH, and for K, Na, P and Se in the DJ. The GWAS revealed a total of 649 significant SNP markers detected for Ca (24), Cu (90), Fe (111), Mn (3), Na (1), P (4), Se (12) and Zn (404) in DH, while for DJ, a total of 787 significant SNP markers were detected for Ca (44), Fe (43), K (498), Na (4), Mg (1), P (94) and Zn (3). Comparing the list of significant markers between DH and DJ revealed that the SNP ARS-BFGL-NGS-4939 was common in both breeds for Zn. This SNP marker is closely linked to the DGAT1 gene. Even though we found significant SNP markers on BTA14 in both DH and DJ for Ca, and Fe these significant SNPs did not overlap.
The results show that Ca, Zn, P and Mg show high heritabilities. In combination with the GWAS results this opens up possibilities to select for specific minerals in bovine milk.
牛奶提供了对人类营养和乳制品质量至关重要的矿物质。为了改变牛奶的矿物质组成以满足人类营养中的饮食需求并改善牛奶的技术特性,深入了解牛奶矿物质含量的遗传学基础非常重要。因此,本研究的目的是:1)估计丹麦荷斯坦牛(DH)(n = 371)和丹麦泽西牛(DJ)(n = 321)牛奶中各矿物质的遗传参数;2)使用全基因组关联研究(GWAS)方法检测与牛奶矿物质含量相关的基因组区域。
对于DH,钙(Ca)(0.72)、锌(Zn)(0.49)和磷(P)(0.46)的遗传力较高;而对于DJ,钙(Ca)(0.63)、锌(Zn)(0.57)和镁(Mg)(0.57)的遗传力较高。此外,DH中铜(Cu)的遗传力中等,DJ中钾(K)、钠(Na)、磷(P)和硒(Se)的遗传力中等。GWAS显示,在DH中,共检测到649个与钙(24个)、铜(90个)、铁(111个)、锰(3个)、钠(1个)、磷(4个)、硒(12个)和锌(404个)相关的显著单核苷酸多态性(SNP)标记;而对于DJ,共检测到787个与钙(44个)、铁(43个)、钾(498个)、钠(4个)、镁(1个)、磷(94个)和锌(3个)相关的显著SNP标记。比较DH和DJ的显著标记列表发现,SNP ARS-BFGL-NGS-4939在两个品种中都是锌的常见标记。这个SNP标记与DGAT1基因紧密连锁。尽管我们在DH和DJ中都发现了位于牛14号染色体(BTA14)上与钙和铁相关的显著SNP标记,但这些显著的SNP并不重叠。
结果表明,钙、锌、磷和镁具有较高的遗传力。结合GWAS结果,这为选择牛奶中的特定矿物质提供了可能性。