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本文引用的文献

1
Crystal structure of DNA polymerase β with DNA containing the base lesion spiroiminodihydantoin in a templating position.DNA聚合酶β与在模板位置含有碱基损伤螺环亚氨基二氢尿嘧啶的DNA的晶体结构。
Biochemistry. 2014 Apr 8;53(13):2075-7. doi: 10.1021/bi500270e. Epub 2014 Mar 26.
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One-electron oxidation reactions of purine and pyrimidine bases in cellular DNA.嘌呤和嘧啶碱基在细胞 DNA 中的单电子氧化反应。
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3
Reconciliation of chemical, enzymatic, spectroscopic and computational data to assign the absolute configuration of the DNA base lesion spiroiminodihydantoin.综合化学、酶学、光谱学和计算数据,确定 DNA 碱基损伤螺环亚氨基二氢嘧啶的绝对构型。
J Am Chem Soc. 2013 Dec 4;135(48):18191-204. doi: 10.1021/ja409254z. Epub 2013 Nov 21.
4
Thermodynamic profiles and nuclear magnetic resonance studies of oligonucleotide duplexes containing single diastereomeric spiroiminodihydantoin lesions.含有单非对映异构螺环亚氨基二氢嘧啶核苷损伤的寡核苷酸双链的热力学谱和核磁共振研究。
Biochemistry. 2013 Feb 26;52(8):1354-63. doi: 10.1021/bi301566v. Epub 2013 Feb 13.
5
A single nuclease-resistant linkage in DNA as a versatile tool for the characterization of DNA lesions: application to the guanine oxidative lesion "G+34" generated by metalloporphyrin/KHSO(5) reagent.DNA 中单链核酸酶抗性连接作为一种用于 DNA 损伤特征分析的多功能工具:应用于金属卟啉/KHSO(5)试剂产生的鸟嘌呤氧化损伤“G+34”。
Chem Res Toxicol. 2012 Nov 19;25(11):2505-12. doi: 10.1021/tx300319y. Epub 2012 Oct 12.
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Lead(II)-catalyzed oxidation of guanine in solution studied with electrospray ionization mass spectrometry.电喷雾电离质谱法研究溶液中 II 价铅催化的鸟嘌呤氧化。
J Phys Chem B. 2012 Oct 4;116(39):11791-7. doi: 10.1021/jp302720z. Epub 2012 Sep 20.
7
Lifetimes and reaction pathways of guanine radical cations and neutral guanine radicals in an oligonucleotide in aqueous solutions.寡核苷酸在水溶液中鸟嘌呤自由基阳离子和中性鸟嘌呤自由基的寿命和反应途径。
J Am Chem Soc. 2012 Mar 14;134(10):4955-62. doi: 10.1021/ja212186w. Epub 2012 Feb 29.
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Chemical and biological consequences of oxidatively damaged guanine in DNA.DNA 中氧化损伤鸟嘌呤的化学和生物学后果。
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Absolute stereochemistry and preferred conformations of urate degradation intermediates from computed and experimental circular dichroism spectra.尿酸降解中间体的计算和实验圆二色光谱的绝对立体化学和优势构象。
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10
Comparison of Transition Metal-Mediated Oxidation Reactions of Guanine in Nucleoside and Single-Stranded Oligodeoxynucleotide Contexts.核苷和单链寡脱氧核苷酸环境中鸟嘌呤的过渡金属介导氧化反应的比较
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电子圆二色光谱的计算研究预测了鸟嘌呤氧化产物5-羧酰胺基-5-甲酰胺基-2-亚氨基乙内酰脲的绝对构型归属。

Computational studies of electronic circular dichroism spectra predict absolute configuration assignments for the guanine oxidation product 5-carboxamido-5-formamido-2-iminohydantoin.

作者信息

Fleming Aaron M, Alshykhly Omar, Orendt Anita M, Burrows Cynthia J

机构信息

Department of Chemistry, University of Utah, 315 South 1400 East, Salt Lake City, Utah 84112-0850, USA.

Department of Chemistry, University of Utah, 315 South 1400 East, Salt Lake City, Utah 84112-0850, USA ; Center for High Performance Computing, University of Utah, Salt Lake City, Utah 84112-0190, USA.

出版信息

Tetrahedron Lett. 2015 Jun 3;56(23):3191-3196. doi: 10.1016/j.tetlet.2014.12.052.

DOI:10.1016/j.tetlet.2014.12.052
PMID:26097262
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC4472374/
Abstract

Oxidation of the guanine heterocycle by two electrons can yield the chiral product 5-carboxamido-5-formamido-2-iminohydantoin (). The free base enantiomers were synthesized from 2'-deoxyguanosine oxidized with a Cu(II)/HO oxidant system followed by hydrolysis of the -glycosidic bond. These isomers were each studied by electronic circular dichroism spectroscopy for determination of their absolute configurations. Time-dependent density functional theory calculations of the expected spectra were completed in both the gas phase and with solvent modeling in order to interpret the experimental spectra and provide the absolute configuration assignments.

摘要

鸟嘌呤杂环经双电子氧化可生成手性产物5-羧酰胺基-5-甲酰胺基-2-亚氨基乙内酰脲()。游离碱对映体由2'-脱氧鸟苷经Cu(II)/HO氧化体系氧化,随后糖苷键水解合成。通过电子圆二色光谱对这些异构体进行了研究,以确定它们的绝对构型。在气相和溶剂模拟条件下完成了预期光谱的含时密度泛函理论计算,以便解释实验光谱并给出绝对构型归属。