Muhammad Syed Aun, Fatima Nighat
Institute of Molecular Biology and Biotechnology, Bahauddin Zakariya University, Multan, Pakistan.
Department of Pharmacy, COMSATS Institute of Information Technology, Abbottabad, Pakistan.
Pharmacogn Mag. 2015 May;11(Suppl 1):S123-6. doi: 10.4103/0973-1296.157712.
The purpose of this study was to analyze the inhibitory action of quercetin glycosides by computational docking studies. For this, natural metabolite quercetin glycosides isolated from buckwheat and onions were used as ligand for molecular interaction. The crystallographic structure of molecular target angiotensin-converting enzyme (ACE) (peptidyl-dipeptidase A) was obtained from PDB database (PDB ID: 1O86). Enalapril, a well-known brand of ACE inhibitor was taken as the standard for comparative analysis. Computational docking analysis was performed using PyRx, AutoDock Vina option based on scoring functions. The quercetin showed optimum binding affinity with a molecular target (angiotensin-converting-enzyme) with the binding energy of -8.5 kcal/mol as compared to the standard (-7.0 kcal/mol). These results indicated that quercetin glycosides could be one of the potential ligands to treat hypertension, myocardial infarction, and congestive heart failure.
本研究的目的是通过计算机对接研究分析槲皮素糖苷的抑制作用。为此,将从荞麦和洋葱中分离出的天然代谢产物槲皮素糖苷用作分子相互作用的配体。分子靶标血管紧张素转换酶(ACE)(肽基二肽酶A)的晶体结构从蛋白质数据银行(PDB)数据库获得(PDB ID:1O86)。以知名品牌的ACE抑制剂依那普利作为比较分析的标准。基于评分函数,使用PyRx的AutoDock Vina选项进行计算机对接分析。与标准品(-7.0千卡/摩尔)相比,槲皮素与分子靶标(血管紧张素转换酶)显示出最佳结合亲和力,结合能为-8.5千卡/摩尔。这些结果表明,槲皮素糖苷可能是治疗高血压、心肌梗死和充血性心力衰竭的潜在配体之一。