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拟南芥悬浮培养细胞中响应植物利尿肽的定量蛋白质组变化

Quantitative proteome changes in Arabidopsis thaliana suspension-cultured cells in response to plant natriuretic peptides.

作者信息

Turek Ilona, Wheeler Janet I, Gehring Chris, Irving Helen R, Marondedze Claudius

机构信息

Division of Biological and Environmental Science and Engineering, King Abdullah University of Science and Technology, Thuwal, Saudi Arabia.

Drug Discovery Biology, Monash Institute of Pharmaceutical Sciences, Monash University, Melbourne, VIC, Australia.

出版信息

Data Brief. 2015 Jun 30;4:336-43. doi: 10.1016/j.dib.2015.06.013. eCollection 2015 Sep.

DOI:10.1016/j.dib.2015.06.013
PMID:26217812
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC4510553/
Abstract

Proteome changes in the Arabidopsis thaliana suspension cells in response to the A. thaliana plant natriuretic peptide (PNP), AtPNP-A (At2g18660) were assessed using quantitative proteomics employing tandem mass tag (TMT) labeling and tandem mass spectrometry (LC-MS/MS). In this study, we characterized temporal responses of suspension-cultured cells to 1 nM and 10 pM AtPNP-A at 0, 10 and 30 min post-treatment. Both concentrations we found to yield a distinct differential proteome signature. The data shown in this article are associated with the article "Plant natriuretic peptides induce a specific set of proteins diagnostic for an adaptive response to abiotic stress" by Turek et al. (Front. Plant Sci. 5 (2014) 661) and have been deposited to the ProteomeXchange with identifier PXD001386.

摘要

利用采用串联质谱标签(TMT)标记和串联质谱(LC-MS/MS)的定量蛋白质组学方法,评估了拟南芥悬浮细胞中蛋白质组对拟南芥植物钠尿肽(PNP)AtPNP-A(At2g18660)的响应。在本研究中,我们对悬浮培养细胞在处理后0、10和30分钟时对1 nM和10 pM AtPNP-A的时间响应进行了表征。我们发现这两种浓度都会产生明显不同的差异蛋白质组特征。本文所示数据与Turek等人发表的文章《植物钠尿肽诱导一组特定的蛋白质,作为对非生物胁迫适应性反应的诊断标志物》(《植物科学前沿》5(2014)661)相关,并已存入蛋白质组交换库,标识符为PXD001386。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/507b/4510553/26eafd13f24c/gr2.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/507b/4510553/3e51895d7804/gr1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/507b/4510553/26eafd13f24c/gr2.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/507b/4510553/3e51895d7804/gr1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/507b/4510553/26eafd13f24c/gr2.jpg

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本文引用的文献

1
Plant natriuretic peptides induce proteins diagnostic for an adaptive response to stress.植物利钠肽可诱导产生用于诊断应激适应性反应的蛋白质。
Front Plant Sci. 2014 Nov 26;5:661. doi: 10.3389/fpls.2014.00661. eCollection 2014.
2
ProteomeXchange provides globally coordinated proteomics data submission and dissemination.蛋白质组学交换库提供全球协调的蛋白质组学数据提交和传播服务。
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Identification and quantitation of signal molecule-dependent protein phosphorylation.信号分子依赖性蛋白磷酸化的鉴定与定量
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GENEVESTIGATOR. Arabidopsis microarray database and analysis toolbox.GENEVESTIGATOR. 拟南芥微阵列数据库及分析工具箱。
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AtPNP-A is a systemically mobile natriuretic peptide immunoanalogue with a role in Arabidopsis thaliana cell volume regulation.AtPNP-A是一种具有系统性移动性的利尿钠肽免疫类似物,在拟南芥细胞体积调节中发挥作用。
FEBS Lett. 2004 Jan 2;556(1-3):99-103. doi: 10.1016/s0014-5793(03)01384-x.
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Nutrient requirements of suspension cultures of soybean root cells.大豆根细胞悬浮培养的营养需求。
Exp Cell Res. 1968 Apr;50(1):151-8. doi: 10.1016/0014-4827(68)90403-5.
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A rapid and sensitive method for the quantitation of microgram quantities of protein utilizing the principle of protein-dye binding.一种利用蛋白质 - 染料结合原理对微克级蛋白质进行定量的快速灵敏方法。
Anal Biochem. 1976 May 7;72:248-54. doi: 10.1016/0003-2697(76)90527-3.