Reen F Jerry, Romano Stefano, Dobson Alan D W, O'Gara Fergal
BIOMERIT Research Centre, School of Microbiology, University College Cork-National University of Ireland, Cork, Ireland.
School of Microbiology, University College Cork-National University of Ireland, Cork, Ireland.
Mar Drugs. 2015 Jul 31;13(8):4754-83. doi: 10.3390/md13084754.
Unlocking the rich harvest of marine microbial ecosystems has the potential to both safeguard the existence of our species for the future, while also presenting significant lifestyle benefits for commercial gain. However, while significant advances have been made in the field of marine biodiscovery, leading to the introduction of new classes of therapeutics for clinical medicine, cosmetics and industrial products, much of what this natural ecosystem has to offer is locked in, and essentially hidden from our screening methods. Releasing this silent potential represents a significant technological challenge, the key to which is a comprehensive understanding of what controls these systems. Heterologous expression systems have been successful in awakening a number of these cryptic marine biosynthetic gene clusters (BGCs). However, this approach is limited by the typically large size of the encoding sequences. More recently, focus has shifted to the regulatory proteins associated with each BGC, many of which are signal responsive raising the possibility of exogenous activation. Abundant among these are the LysR-type family of transcriptional regulators, which are known to control production of microbial aromatic systems. Although the environmental signals that activate these regulatory systems remain unknown, it offers the exciting possibility of evoking mimic molecules and synthetic expression systems to drive production of potentially novel natural products in microorganisms. Success in this field has the potential to provide a quantum leap forward in medical and industrial bio-product development. To achieve these new endpoints, it is clear that the integrated efforts of bioinformaticians and natural product chemists will be required as we strive to uncover new and potentially unique structures from silent or cryptic marine gene clusters.
挖掘海洋微生物生态系统的丰富宝藏,不仅有可能保障我们人类物种未来的生存,还能带来显著的生活方式益处以获取商业利益。然而,尽管海洋生物发现领域已取得重大进展,带来了用于临床医学、化妆品和工业产品的新型治疗药物,但这个自然生态系统所提供的许多东西仍被封存,基本上无法通过我们的筛选方法被发现。释放这种潜在的沉默资源是一项重大的技术挑战,其关键在于全面理解控制这些系统的因素。异源表达系统已成功激活了许多这些隐秘的海洋生物合成基因簇(BGCs)。然而,这种方法受到编码序列通常较大的限制。最近,重点已转向与每个BGC相关的调节蛋白,其中许多对信号有响应,这增加了外源激活的可能性。其中丰富的是LysR型转录调节因子家族,已知其控制微生物芳香系统的产生。尽管激活这些调节系统的环境信号仍然未知,但它提供了令人兴奋的可能性,即引发模拟分子和合成表达系统,以驱动微生物中潜在新型天然产物的产生。该领域的成功有可能在医学和工业生物产品开发方面实现巨大飞跃。为了实现这些新目标,显然需要生物信息学家和天然产物化学家的共同努力,因为我们努力从沉默或隐秘的海洋基因簇中发现新的、可能独特的结构。