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恶臭假单胞菌S16中一个用于3-琥珀酰吡啶降解的新基因moaE的功能鉴定

Functional Identification of a Novel Gene, moaE, for 3-Succinoylpyridine Degradation in Pseudomonas putida S16.

作者信息

Jiang Yi, Tang Hongzhi, Wu Geng, Xu Ping

机构信息

State Key Laboratory of Microbial Metabolism, and School of Life Sciences &Biotechnology, Shanghai Jiao Tong University, Shanghai 200240, People's Republic of China.

Joint International Research Laboratory of Metabolic &Developmental Sciences, Shanghai Jiao Tong University, Shanghai 200240, People's Republic of China.

出版信息

Sci Rep. 2015 Aug 25;5:13464. doi: 10.1038/srep13464.

DOI:10.1038/srep13464
PMID:26304596
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC4548258/
Abstract

Microbial degradation of N-heterocyclic compounds, including xanthine, quinoline, nicotinate, and nicotine, frequently requires molybdenum hydroxylases. The intramolecular electron transfer chain of molybdenum hydroxylases consists of a molybdenum cofactor, two distinct [2Fe-2S] clusters, and flavin adenine dinucleotide. 3-Succinoylpyridine monooxygenase (Spm), responsible for the transformation from 3-succinoylpyridine to 6-hydroxy-3-succinoylpyridine, is a crucial enzyme in the pyrrolidine pathway of nicotine degradation in Pseudomonas. Our previous work revealed that the heterotrimeric enzyme (SpmA, SpmB, and SpmC) requires molybdopterin cytosine dinucleotide as a cofactor for their activities. In this study, we knocked out four genes, including PPS_1556, PPS_2936, PPS_4063, and PPS_4397, and found that a novel gene, PPS_4397 encoding moaE, is necessary for molybdopterin cytosine dinucleotide biosynthesis. Resting cell reactions of the moaE deletion mutant incubated with 3 g l(-1) nicotine at 30 °C resulted in accumulation of 3-succinoylpyridine, and the strain complemented by the moaE gene regained the ability to convert 3-succinoylpyridine. In addition, reverse transcription-quantitative polymerase chain reaction analysis indicated that the transcriptional levels of the genes of moaE, spmA, and spmC of Pseudomonas putida S16 were distinctly higher when grown in nicotine medium than in glycerol medium.

摘要

微生物对包括黄嘌呤、喹啉、烟酸酯和尼古丁在内的含氮杂环化合物的降解通常需要钼羟化酶。钼羟化酶的分子内电子传递链由一个钼辅因子、两个不同的[2Fe-2S]簇和黄素腺嘌呤二核苷酸组成。3-琥珀酰吡啶单加氧酶(Spm)负责将3-琥珀酰吡啶转化为6-羟基-3-琥珀酰吡啶,是假单胞菌尼古丁降解吡咯烷途径中的关键酶。我们之前的工作表明,异源三聚体酶(SpmA、SpmB和SpmC)需要钼蝶呤胞嘧啶二核苷酸作为其活性的辅因子。在本研究中,我们敲除了四个基因,包括PPS_1556、PPS_2936、PPS_4063和PPS_4397,发现一个新基因PPS_4397编码moaE,它是钼蝶呤胞嘧啶二核苷酸生物合成所必需的。在30℃下,用3g l(-1)尼古丁培养的moaE缺失突变体的静息细胞反应导致3-琥珀酰吡啶积累,而用moaE基因互补的菌株恢复了将3-琥珀酰吡啶转化的能力。此外,逆转录定量聚合酶链反应分析表明,恶臭假单胞菌S16的moaE、spmA和spmC基因在尼古丁培养基中生长时的转录水平明显高于在甘油培养基中。

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本文引用的文献

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Green strategy from waste to value-added-chemical production: efficient biosynthesis of 6-hydroxy-3-succinoyl-pyridine by an engineered biocatalyst.从废物到增值化学品生产的绿色策略:利用工程化生物催化剂高效生物合成6-羟基-3-琥珀酰基吡啶
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A sirA-like gene, sirA2, is essential for 3-succinoyl-pyridine metabolism in the newly isolated nicotine-degrading Pseudomonas sp. HZN6 strain.一个类似 sirA 的基因 sirA2 对于新分离的尼古丁降解假单胞菌 HZN6 菌株中 3-琥珀酰吡啶代谢是必需的。
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