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从人类分离出的两株欣氏博德特氏菌的全基因组序列

Complete Genome Sequences of Two Bordetella hinzii Strains Isolated from Humans.

作者信息

Weigand Michael R, Changayil Shankar, Kulasekarapandian Yasvanth, Tondella M Lucia

机构信息

Centers for Disease Control and Prevention, Atlanta, Georgia, USA

Centers for Disease Control and Prevention, Atlanta, Georgia, USA.

出版信息

Genome Announc. 2015 Aug 27;3(4):e00965-15. doi: 10.1128/genomeA.00965-15.

DOI:10.1128/genomeA.00965-15
PMID:26316634
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC4551878/
Abstract

Bordetella hinzii is primarily recovered from poultry but can also colonize mammalian hosts and immunocompromised humans. Here, we report the first complete genome sequences of B. hinzii in two isolates recovered from humans. The availability of these sequences will hopefully aid in identifying host-specific determinants variably present within this species.

摘要

欣氏博德特氏菌主要从家禽中分离得到，但也可定殖于哺乳动物宿主和免疫功能低下的人类。在此，我们报告了从人类分离出的两株欣氏博德特氏菌的首个完整基因组序列。这些序列的可得性有望有助于识别该物种中可变存在的宿主特异性决定因素。

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本文引用的文献

1
Draft Genome Sequences of Six Bordetella hinzii Isolates Acquired from Avian and Mammalian Hosts.从禽类和哺乳动物宿主中分离出的六株欣氏博德特氏菌的基因组序列草图
Genome Announc. 2015 Mar 19;3(2):e00081-15. doi: 10.1128/genomeA.00081-15.
2
Prokka: rapid prokaryotic genome annotation.Prokka：快速的原核生物基因组注释。
Bioinformatics. 2014 Jul 15;30(14):2068-9. doi: 10.1093/bioinformatics/btu153. Epub 2014 Mar 18.
3
When whole-genome alignments just won't work: kSNP v2 software for alignment-free SNP discovery and phylogenetics of hundreds of microbial genomes.当全基因组比对无法奏效时：用于数百个微生物基因组的无比对单核苷酸多态性（SNP）发现及系统发育分析的kSNP v2软件
PLoS One. 2013 Dec 9;8(12):e81760. doi: 10.1371/journal.pone.0081760. eCollection 2013.
4
Draft Genome Sequences of Bordetella hinzii and Bordetella trematum.欣氏博德特氏菌和震颤博德特氏菌的基因组序列草图
Genome Announc. 2013 Oct 24;1(5):e00838-13. doi: 10.1128/genomeA.00838-13.
5
Bordetella hinzii in rodents, Southeast Asia.东南亚啮齿动物中的欣氏博德特菌。
Emerg Infect Dis. 2013 Mar;19(3):502-3. doi: 10.3201/eid1903.120987.
6
Prevalence of Bordetella hinzii in mice in experimental facilities in Japan.日本实验设施中小鼠中博德特氏菌的流行情况。
Res Vet Sci. 2012 Oct;93(2):624-6. doi: 10.1016/j.rvsc.2011.11.001. Epub 2011 Nov 29.
7
Strain-specific virulence of Bordetella hinzii in poultry.欣氏博德特氏菌在家禽中的菌株特异性毒力
Avian Dis. 2009 Mar;53(1):50-4. doi: 10.1637/8388-070108-Reg.1.
8
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J Clin Microbiol. 2004 May;42(5):2335-7. doi: 10.1128/JCM.42.5.2335-2337.2004.
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J Infect. 2000 May;40(3):298-9. doi: 10.1053/jinf.2000.0646.