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根表铁膜上三价砷氧化菌的多样性和丰度对水稻吸收砷的生物有效性至关重要。

The diversity and abundance of As(III) oxidizers on root iron plaque is critical for arsenic bioavailability to rice.

作者信息

Hu Min, Li Fangbai, Liu Chuanping, Wu Weijian

机构信息

Guangdong Key Laboratory of Agricultural Environment Pollution Integrated Control, Guangdong Institute of Eco-Environmental and Soil Sciences, Guangzhou 510650, PR China.

出版信息

Sci Rep. 2015 Sep 1;5:13611. doi: 10.1038/srep13611.

Abstract

Iron plaque is a strong adsorbent on rice roots, acting as a barrier to prevent metal uptake by rice. However, the role of root iron plaque microbes in governing metal redox cycling and metal bioavailability is unknown. In this study, the microbial community structure on the iron plaque of rice roots from an arsenic-contaminated paddy soil was explored using high-throughput next-generation sequencing. The microbial composition and diversity of the root iron plaque were significantly different from those of the bulk and rhizosphere soils. Using the aoxB gene as an identifying marker, we determined that the arsenite-oxidizing microbiota on the iron plaque was dominated by Acidovorax and Hydrogenophaga-affiliated bacteria. More importantly, the abundance of arsenite-oxidizing bacteria (AsOB) on the root iron plaque was significantly negatively correlated with the arsenic concentration in the rice root, straw and grain, indicating that the microbes on the iron plaque, particularly the AsOB, were actively catalyzing arsenic transformation and greatly influencing metal uptake by rice. This exploratory research represents a preliminary examination of the microbial community structure of the root iron plaque formed under arsenic pollution and emphasizes the importance of the root iron plaque environment in arsenic biogeochemical cycling compared with the soil-rhizosphere biotope.

摘要

铁膜是水稻根上的一种强吸附剂,起到阻止水稻吸收金属的屏障作用。然而,根铁膜微生物在控制金属氧化还原循环和金属生物有效性方面的作用尚不清楚。在本研究中,利用高通量下一代测序技术探究了受砷污染稻田土壤中水稻根铁膜上的微生物群落结构。根铁膜的微生物组成和多样性与土体和根际土壤的显著不同。以aoxB基因作为识别标记,我们确定铁膜上的亚砷酸盐氧化微生物群以嗜酸菌属和嗜氢菌属相关细菌为主。更重要的是,根铁膜上亚砷酸盐氧化细菌(AsOB)的丰度与水稻根、稻草和谷粒中的砷浓度显著负相关,表明铁膜上的微生物,特别是AsOB,正在积极催化砷的转化,并极大地影响水稻对金属的吸收。这项探索性研究是对砷污染条件下形成的根铁膜微生物群落结构的初步考察,并强调了与土壤-根际生物群落相比,根铁膜环境在砷生物地球化学循环中的重要性。

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