Li Lei, Liu Guanghua, Sun Tanyi, Xin Tianrong, Li Meiyun, Zou Zhiwen, Xia Bin
a College of Life Science, Nanchang University , Nanchang , China and.
b College of Agronomy, Zhongkai University of Agriculture and Engineering , Guangzhou , China.
Mitochondrial DNA A DNA Mapp Seq Anal. 2016 Sep;27(5):3703-4. doi: 10.3109/19401736.2015.1079865. Epub 2015 Sep 2.
In this study, the complete mitochondrial genome of Cryptolestes pusillus (GenBank accession number KT070713) was sequenced by long PCR and primer walking methods. The total length of mitochondrial DNA is 15 502 bp and contains 13 protein-coding genes, two ribosomal RNA genes, 22 transfer RNA genes, and a A + T-rich region. The base composition of the genome is A (39.04%), T (37.07%), C (23.4%), and G (14.6%). Except for COI and ATP8 with TCC and ATC as start codon, respectively, the remaining protein-coding genes initiated with the three orthodox start codons. Two complete stop codons (TAA and TAG) and two incomplete stop codons (COIII stop with T and ND5 stop with TA) were used in the protein-coding genes. The A + T-rich region is located between 12s rRNA and tRNA(Ile) with the length of 859 bp. The phylogenetic relationships of Coleoptera species were constructed based on the nucleotide sequences of 13 protein-coding genes of mitogenome using the neighbor-joining method. The molecular-based phylogenetic analysis supported the traditional morphological classification on relationships within Coleoptera species.
在本研究中,采用长PCR和引物步移法对小眼锯谷盗(GenBank登录号KT070713)的完整线粒体基因组进行了测序。线粒体DNA全长15502 bp,包含13个蛋白质编码基因、2个核糖体RNA基因、22个转运RNA基因和一个富含A+T的区域。基因组的碱基组成为A(39.04%)、T(37.07%)、C(23.4%)和G(14.6%)。除COI和ATP8分别以TCC和ATC作为起始密码子外,其余蛋白质编码基因均以三种传统起始密码子起始。蛋白质编码基因中使用了两个完整的终止密码子(TAA和TAG)和两个不完整的终止密码子(COIII以T终止,ND5以TA终止)。富含A+T的区域位于12s rRNA和tRNA(Ile)之间,长度为859 bp。利用邻接法基于有丝分裂基因组13个蛋白质编码基因的核苷酸序列构建了鞘翅目物种的系统发育关系。基于分子的系统发育分析支持了鞘翅目物种间关系的传统形态学分类。