Suppr超能文献

茶毛虫(鳞翅目:枯叶蛾科)线粒体全基因组及相关系统发育分析

The complete mitochondrial genome of Trabala vishnou guttata (Lepidoptera: Lasiocampidae) and the related phylogenetic analyses.

作者信息

Wu Liuyu, Xiong Xiao, Wang Xuming, Xin Tianrong, Wang Jing, Zou Zhiwen, Xia Bin

机构信息

College of Life Science, Nanchang University, Nanchang, 330031, China.

Plant Protection Unit, Dayu County, Ganzhou, 341500, China.

出版信息

Genetica. 2016 Dec;144(6):675-688. doi: 10.1007/s10709-016-9934-x. Epub 2016 Oct 21.

Abstract

The bluish yellow lappet moth, Trabala vishnou guttata is an extraordinarily important pest in China. The complete mitochondrial genome is sequenced and determined firstly, which is based on traditional PCR amplification and primer walking methods with a length of 15,281 bp, including 13 protein-coding (PCG) genes, 22 transfer RNA (rRNA) genes, two ribosomal RNA (tRNA) genes, and an A + T-rich region. The gene order and orientation of the T. vishnou guttata mitogenome were identical to the other sequenced Lasiocampidae species. The overall nucleotide composition of T. vishnou guttata is A (40.27 %), T (40.59 %), C (11.58 %) and G (7.56 %), respectively. All the PCGs initiate with the three orthodox start codons ATN except for coxI with CGA start codon. Three PCGs (coxI, coxII and nad4) used incomplete stop codon T, while the other 10 PCGs terminate with complete stop codon TAA. All tRNA genes have a typical clover-leaf structure except for the absence of a dihydrouridine arm in trnS (AGN). The length of A + T-rich region is 383 bp. Phylogeny is established to reveal the genetic relationship between T. vishnou guttata and other lepidopteran species based on 13 PCGs nucleotide sequences of the sequenced species (32 taxa) by Maximum likelihood and Bayesian methods. Phylogenetic analyses presents that T. vishnou guttata and its closely related species (Dendrolimus taxa) are clustered on Lasiocampidae group. It is a sister clade relationship between Lasiocampidae and other families in Bombycoidea with a bootstrap value of 83 % and a posterior probability of 0.75. This study supports that Lasiocampidae may be independent from Bombycoidea.

摘要

黄褐天幕毛虫(Trabala vishnou guttata)是中国一种极其重要的害虫。首次基于传统PCR扩增和引物步移法对其完整线粒体基因组进行了测序和测定,该基因组长度为15281bp,包括13个蛋白质编码(PCG)基因、22个转运RNA(rRNA)基因、2个核糖体RNA(tRNA)基因和一个富含A+T的区域。黄褐天幕毛虫线粒体基因组的基因顺序和方向与其他已测序的枯叶蛾科物种相同。黄褐天幕毛虫的总体核苷酸组成分别为A(40.27%)、T(40.59%)、C(11.58%)和G(7.56%)。除coxI以CGA起始密码子起始外,所有PCG均以三个正统起始密码子ATN起始。三个PCG(coxI、coxII和nad4)使用不完全终止密码子T,而其他10个PCG以完整终止密码子TAA终止。除trnS(AGN)中缺少二氢尿苷臂外,所有tRNA基因均具有典型的三叶草结构。富含A+T区域的长度为383bp。基于已测序物种(32个分类单元)的13个PCG核苷酸序列,采用最大似然法和贝叶斯法构建系统发育树,以揭示黄褐天幕毛虫与其他鳞翅目物种之间的遗传关系。系统发育分析表明,黄褐天幕毛虫及其近缘物种(松毛虫类群)聚集在枯叶蛾科类群中。枯叶蛾科与蚕蛾总科中的其他科之间存在姐妹分支关系,自展值为83%,后验概率为0.75。本研究支持枯叶蛾科可能独立于蚕蛾总科。

文献AI研究员

20分钟写一篇综述,助力文献阅读效率提升50倍。

立即体验

用中文搜PubMed

大模型驱动的PubMed中文搜索引擎

马上搜索

文档翻译

学术文献翻译模型,支持多种主流文档格式。

立即体验