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在巴塔哥尼亚地区开展的基于家族的全基因组关联研究证实了杜氏肌营养不良基因座与唇腭裂之间的关联。

Family-based genome-wide association study in Patagonia confirms the association of the DMD locus and cleft lip and palate.

作者信息

Fonseca Renata F, de Carvalho Flávia M, Poletta Fernando A, Montaner David, Dopazo Joaquin, Mereb Juan C, Moreira Miguel A M, Seuanez Hector N, Vieira Alexandre R, Castilla Eduardo E, Orioli Iêda M

机构信息

Department of Genetics, Institute of Biology, Federal University of Rio de Janeiro, Rio de Janeiro, Brazil.

ECLAMC (Latin-American Collaborative Study of Congenital Malformations) at INAGEMP (National Institute of Population Medical Genetics), Rio de Janeiro, Brazil.

出版信息

Eur J Oral Sci. 2015 Oct;123(5):381-384. doi: 10.1111/eos.12212. Epub 2015 Sep 1.

DOI:10.1111/eos.12212
PMID:26331285
Abstract

The etiology of cleft lip with or without cleft palate (CL±P) is complex and heterogeneous, and multiple genetic and environmental factors are involved. Some candidate genes reported to be associated with oral clefts are located on the X chromosome. At least three genes causing X-linked syndromes [midline 1 (MID1), oral-facial-digital syndrome 1 (OFD1), and dystrophin (DMD)] were previously found to be associated with isolated CL±P. We attempted to confirm the role of X-linked genes in the etiology of isolated CL±P in a South American population through a family-based genome-wide scan. We studied 27 affected children and their mothers, from 26 families, in a Patagonian population with a high prevalence of CL±P. We conducted an exploratory analysis of the X chromosome to identify candidate regions associated with CL±P. Four genomic segments were identified, two of which showed a statistically significant association with CL±P. One is an 11-kb region of Xp21.1 containing the DMD gene, and the other is an intergenic region (8.7 kb; Xp11.4). Our results are consistent with recent data on the involvement of the DMD gene in the etiology of CL±P. The MID1 and OFD1 genes were not included in the four potential CL±P-associated X-chromosome genomic segments.

摘要

唇裂伴或不伴腭裂(CL±P)的病因复杂且具有异质性,涉及多种遗传和环境因素。一些据报道与口腔裂隙相关的候选基因位于X染色体上。先前发现至少三个导致X连锁综合征的基因[中线1(MID1)、口面指综合征1(OFD1)和肌营养不良蛋白(DMD)]与孤立性CL±P相关。我们试图通过基于家系的全基因组扫描来证实X连锁基因在南美人群孤立性CL±P病因中的作用。我们研究了来自26个家庭的27名患病儿童及其母亲,这些家庭来自巴塔哥尼亚地区,该地区CL±P患病率较高。我们对X染色体进行了探索性分析,以确定与CL±P相关的候选区域。共识别出四个基因组片段,其中两个与CL±P显示出统计学上的显著关联。一个是位于Xp21.1的包含DMD基因的11kb区域,另一个是基因间区域(8.7kb;Xp11.4)。我们的结果与最近关于DMD基因参与CL±P病因的研究数据一致。MID1和OFD1基因未包含在四个潜在的与CL±P相关的X染色体基因组片段中。

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