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合成动态电路设计的进展:利用新型合成元件设计新一代基因振荡器。

Advances in synthetic dynamic circuits design: using novel synthetic parts to engineer new generations of gene oscillations.

机构信息

Microbiology Graduate Program, University of Texas at Austin, 100 East 24th Street, A6500, Austin, TX 78712, USA.

McKetta Department of Chemical Engineering, University of Texas at Austin, 200 East Dean Keeton Street, Stop C0400, Austin, TX 78712, USA.

出版信息

Curr Opin Biotechnol. 2015 Dec;36:161-7. doi: 10.1016/j.copbio.2015.08.020. Epub 2015 Sep 3.

Abstract

As bioengineering applications expand, the need to design and implement circuits that exhibit dynamic properties increases. In particular, schemes that control precise patterns of gene expression as a function of time are essential for balancing multiple metabolic objectives in natural and synthetic systems. Given that modularity has been an important component of dynamic circuits, recent efforts to improve dynamic circuits have focused on replacing old parts for new components that increase the robustness, stability, and tunability. In this review, we show that incorporation of novel components such as regulatory noncoding RNAs (ncRNAs), promoter-transcription factor pairs, and metabolite sensors have allowed traditional dynamic circuits to obtain more robust functionality and improved dynamic properties.

摘要

随着生物工程应用的扩展,设计和实现表现出动态特性的电路的需求不断增加。特别是,作为时间函数控制精确基因表达模式的方案对于在天然和合成系统中平衡多个代谢目标至关重要。鉴于模块化一直是动态电路的重要组成部分,最近提高动态电路性能的努力集中在用新的组件替换旧组件,这些新组件增加了鲁棒性、稳定性和可调性。在这篇综述中,我们表明,将新型组件(如调控非编码 RNA(ncRNA)、启动子-转录因子对和代谢物传感器)纳入传统的动态电路中,可以使其获得更强大的功能和改善动态特性。

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