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基质辅助激光解吸电离飞行时间质谱作为猪链球菌鉴定替代工具的评估

Assessment of MALDI-TOF MS as Alternative Tool for Streptococcus suis Identification.

作者信息

Pérez-Sancho Marta, Vela Ana Isabel, García-Seco Teresa, Gottschalk Marcelo, Domínguez Lucas, Fernández-Garayzábal José Francisco

机构信息

Centro de Vigilancia Sanitaria Veterinaria (VISAVET), Universidad Complutense , Madrid , Spain ; Campus de Excelencia Internacional (CEI) Moncloa, Universidad Politécnica de Madrid (UPM), Universidad Complutense de Madrid (UCM) , Madrid , Spain.

Centro de Vigilancia Sanitaria Veterinaria (VISAVET), Universidad Complutense , Madrid , Spain ; Departamento de Sanidad Animal, Facultad de Veterinaria, Universidad Complutense , Madrid , Spain.

出版信息

Front Public Health. 2015 Aug 21;3:202. doi: 10.3389/fpubh.2015.00202. eCollection 2015.

Abstract

The accuracy of matrix-assisted laser desorption ionization time-of-flight mass spectrometry (MALDI-TOF MS) for identifying Streptococcus suis isolates obtained from pigs, wild animals, and humans was evaluated using a PCR-based identification assay as the gold standard. In addition, MALDI-TOF MS was compared with the commercial multi-tests Rapid ID 32 STREP system. From the 129 S. suis isolates included in the study and identified by the molecular method, only 31 isolates (24.03%) had score values ≥2.300 and 79 isolates (61.24%) gave score values between 2.299 and 2.000. After updating the currently available S. suis MALDI Biotyper database with the spectra of three additional clinical isolates of serotypes 2, 7, and 9, most isolates had statistically significant higher score values (mean score: 2.65) than those obtained using the original database (mean score: 2.182). Considering the results of the present study, we suggest using a less restrictive threshold score of ≥2.000 for reliable species identification of S. suis. According to this cut-off value, a total of 125 S. suis isolates (96.9%) were correctly identified using the updated database. These data indicate an excellent performance of MALDI-TOF MS for the identification of S. suis.

摘要

以基于聚合酶链反应(PCR)的鉴定方法作为金标准,评估了基质辅助激光解吸电离飞行时间质谱(MALDI-TOF MS)对从猪、野生动物和人类中分离出的猪链球菌的鉴定准确性。此外,还将MALDI-TOF MS与商业多重检测快速鉴定32 STREP系统进行了比较。在该研究纳入并通过分子方法鉴定的129株猪链球菌分离株中,只有31株(24.03%)的得分值≥2.300,79株(61.24%)的得分值在2.299至2.000之间。在用血清型2、7和9的另外三株临床分离株的光谱更新当前可用的猪链球菌MALDI Biotyper数据库后,大多数分离株的得分值(平均得分:2.65)在统计学上显著高于使用原始数据库获得的得分值(平均得分:2.182)。考虑到本研究的结果,我们建议使用≥2.000的较低限制阈值得分来可靠地鉴定猪链球菌。根据这个临界值,使用更新后的数据库共正确鉴定了125株猪链球菌分离株(96.9%)。这些数据表明MALDI-TOF MS在猪链球菌鉴定方面具有出色的性能。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ecde/4543777/16c4f225dca0/fpubh-03-00202-g001.jpg

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