Chen Carl Z, Gorham Ronald D, Gaieb Zied, Morikis Dimitrios
Department of Bioengineering, University of California, Riverside, CA 92521, USA.
Mol Biol Int. 2015;2015:967465. doi: 10.1155/2015/967465. Epub 2015 Aug 19.
Adenoviruses bind to a variety of human cells to cause infection. Both the B2 adenovirus 11 and B1 adenovirus 21 use protein knobs to bind to complement regulator CD46(SCR1-2) in order to gain entry into host cells. In each complex, the two proteins are highly negatively charged but bind to each other at an interface with oppositely charged surface patches. We computationally generated single-alanine mutants of charged residues in the complexes CD46(SCR1-2)-Ad11k and CD46(SCR1-2)-Ad21k. We used electrostatic clustering and Poisson-Boltzmann free energy calculations to propose a hypothesis on the role of electrostatics in association. Our results delineate specific interfacial electrostatic interactions that are critical for association in both CD46(SCR1-2)-Ad11k and CD46(SCR1-2)-Ad21k. These results will serve as a predictive tool in the selection of mutants with desired binding affinity in experimental mutagenesis studies. This study will also serve as a foundation for the design of inhibitors to treat adenovirus infections.
腺病毒通过与多种人类细胞结合来引发感染。B2型腺病毒11和B1型腺病毒21都利用蛋白突起与补体调节蛋白CD46(SCR1-2)结合,从而进入宿主细胞。在每个复合物中,这两种蛋白质都带高度负电荷,但在具有相反电荷表面斑块的界面处相互结合。我们通过计算生成了复合物CD46(SCR1-2)-Ad11k和CD46(SCR1-2)-Ad21k中带电残基的单丙氨酸突变体。我们使用静电聚类和泊松-玻尔兹曼自由能计算,提出了一个关于静电作用在结合过程中作用的假设。我们的结果描绘了对于CD46(SCR1-2)-Ad11k和CD46(SCR1-2)-Ad21k结合都至关重要的特定界面静电相互作用。这些结果将作为一种预测工具,用于在实验诱变研究中选择具有所需结合亲和力的突变体。本研究还将为设计治疗腺病毒感染的抑制剂奠定基础。