Yoldemir Burak, Ng Bernard, Abugharbieh Rafeef
IEEE Trans Med Imaging. 2016 Feb;35(2):529-38. doi: 10.1109/TMI.2015.2480864. Epub 2015 Sep 22.
A fundamental means for understanding the brain's organizational structure is to group its spatially disparate regions into functional subnetworks based on their interactions. Most community detection techniques are designed for generating partitions, but certain brain regions are known to interact with multiple subnetworks. Thus, the brain's underlying subnetworks necessarily overlap. In this paper, we propose a technique for identifying overlapping subnetworks from weighted graphs with statistical control over false node inclusion. Our technique improves upon the replicator dynamics formulation by incorporating a graph augmentation strategy to enable subnetwork overlaps, and a graph incrementation scheme for merging subnetworks that might be falsely split by replicator dynamics due to its stringent mutual similarity criterion in defining subnetworks. To statistically control for inclusion of false nodes into the detected subnetworks, we further present a procedure for integrating stability selection into our subnetwork identification technique. We refer to the resulting technique as stable overlapping replicator dynamics (SORD). Our experiments on synthetic data show significantly higher accuracy in subnetwork identification with SORD than several state-of-the-art techniques. We also demonstrate higher test-retest reliability in multiple network measures on the Human Connectome Project data. Further, we illustrate that SORD enables identification of neuroanatomically-meaningful subnetworks and network hubs.
理解大脑组织结构的一个基本方法是根据大脑中空间上分散的区域之间的相互作用,将它们分组为功能子网。大多数社区检测技术旨在生成划分,但已知某些脑区会与多个子网相互作用。因此,大脑潜在的子网必然会重叠。在本文中,我们提出了一种从加权图中识别重叠子网的技术,并对错误节点包含进行统计控制。我们的技术通过纳入一种图增强策略以实现子网重叠,以及一种图增量方案来合并可能因复制者动力学在定义子网时严格的相互相似性标准而被错误拆分的子网,对复制者动力学公式进行了改进。为了从统计上控制将错误节点纳入检测到的子网,我们进一步提出了一种将稳定性选择集成到我们的子网识别技术中的程序。我们将由此产生的技术称为稳定重叠复制者动力学(SORD)。我们在合成数据上的实验表明,与几种最先进的技术相比,SORD在子网识别方面具有显著更高的准确性。我们还在人类连接组计划数据的多个网络测量中展示了更高的重测信度。此外,我们说明了SORD能够识别具有神经解剖学意义的子网和网络枢纽。