Shiao Meng-Shin, Chang Jia-Ming, Fan Wen-Lang, Lu Mei-Yeh Jade, Notredame Cedric, Fang Shu, Kondo Rumi, Li Wen-Hsiung
Biodiversity Research Center, Academia Sinica, Taipei, Taiwan Research Center, Faculty of Medicine Ramathibodi Hospital, Mahidol University, Bangkok, Thailand.
Centre for Genomic Regulation (CRG), The Barcelona Institute of Science and Technology, Dr. Aiguader 88, 08003, Barcelona, Spain Universitat Pompeu Fabra (UPF), Barcelona, Spain Institute of Human Genetics (IGH), UPR 1142, CNRS, Montpellier, France.
Genome Biol Evol. 2015 Oct 1;7(10):2843-58. doi: 10.1093/gbe/evv183.
Drosophila sechellia relies exclusively on the fruits of Morinda citrifolia, which are toxic to most insects, including its sibling species Drosophila melanogaster and Drosophila simulans. Although several odorant binding protein (Obp) genes and olfactory receptor (Or) genes have been suggested to be associated with the D. sechellia host shift, a broad view of how chemosensory genes have contributed to this shift is still lacking. We therefore studied the transcriptomes of antennae, the main organ responsible for detecting food resource and oviposition, of D. sechellia and its two sibling species. We wanted to know whether gene expression, particularly chemosensory genes, has diverged between D. sechellia and its two sibling species. Using a very stringent definition of differential gene expression, we found a higher percentage of chemosensory genes differentially expressed in the D. sechellia lineage (7.8%) than in the D. simulans lineage (5.4%); for upregulated chemosensory genes, the percentages were 8.8% in D. sechellia and 5.2% in D. simulans. Interestingly, Obp50a exhibited the highest upregulation, an approximately 100-fold increase, and Or85c--previously reported to be a larva-specific gene--showed approximately 20-fold upregulation in D. sechellia. Furthermore, Ir84a (ionotropic receptor 84a), which has been proposed to be associated with male courtship behavior, was significantly upregulated in D. sechellia. We also found expression divergence in most of the chemosensory gene families between D. sechellia and the two sibling species. Our observations suggest that the host shift of D. sechellia was associated with the enrichment of differentially expressed, particularly upregulated, chemosensory genes.
塞舌尔果蝇完全依赖于巴戟天的果实,而这种果实对包括其姊妹种黑腹果蝇和拟果蝇在内的大多数昆虫来说都是有毒的。尽管已有若干气味结合蛋白(Obp)基因和嗅觉受体(Or)基因被认为与塞舌尔果蝇的宿主转换有关,但对于化学感应基因如何促成这种转换,仍缺乏全面的认识。因此,我们研究了塞舌尔果蝇及其两个姊妹种的触角转录组,触角是负责探测食物资源和产卵的主要器官。我们想了解塞舌尔果蝇与其两个姊妹种之间基因表达,尤其是化学感应基因的表达,是否存在差异。通过使用非常严格的差异基因表达定义,我们发现塞舌尔果蝇谱系中差异表达的化学感应基因比例(7.8%)高于拟果蝇谱系(5.4%);对于上调的化学感应基因,塞舌尔果蝇中的比例为8.8%,拟果蝇中为5.2%。有趣的是,Obp50a的上调幅度最大,约为100倍,而之前报道为幼虫特异性基因的Or85c在塞舌尔果蝇中上调了约20倍。此外,曾被认为与雄性求偶行为有关的离子型受体84a(Ir84a)在塞舌尔果蝇中显著上调。我们还发现塞舌尔果蝇与两个姊妹种之间,大多数化学感应基因家族存在表达差异。我们的观察结果表明,塞舌尔果蝇的宿主转换与差异表达,尤其是上调的化学感应基因的富集有关。