Jurgenson Christopher T, Ealick Steven E, Begley Tadhg P
EcoSal Plus. 2009 Aug;3(2). doi: 10.1128/ecosalplus.3.6.3.7.
The biosynthesis of thiamin pyrophosphate (TPP) in prokaryotes, as represented by the Escherichia coli and the Bacillus subtilis pathways, is summarized in this review. The thiazole heterocycle is formed by the convergence of three separate pathways. First, the condensation of glyceraldehyde 3-phosphate and pyruvate, catalyzed by 1-deoxy-D-xylulose 5-phosphate synthase (Dxs), gives 1-deoxy-D-xylulose 5-phosphate (DXP). Next, the sulfur carrier protein ThiS-COO- is converted to its carboxyterminal thiocarboxylate in reactions catalyzed by ThiF, ThiI, and NifS (ThiF and IscS in B. subtilis). Finally, tyrosine (glycine in B. subtilis) is converted to dehydroglycine by ThiH (ThiO in B. subtilis). Thiazole synthase (ThiG) catalyzes the complex condensation of ThiS-COSH, dehydroglycine, and DXP to give a thiazole tautomer, which is then aromatized to carboxythiazole phosphate by TenI (B. subtilis). Hydroxymethyl pyrimidine phosphate (HMP-P) is formed by a complicated rearrangement reaction of 5-aminoimidazole ribotide (AIR) catalyzed by ThiC. ThiD then generates hydroxymethyl pyrimidine pyrophosphate. The coupling of the two heterocycles and decarboxylation, catalyzed by thiamin phosphate synthase (ThiE), gives thiamin phosphate. A final phosphorylation, catalyzed by ThiL, completes the biosynthesis of TPP, the biologically active form of the cofactor. This review reviews the current status of mechanistic and structural studies on the enzymes involved in this pathway. The availability of multiple orthologs of the thiamin biosynthetic enzymes has also greatly facilitated structural studies, and most of the thiamin biosynthetic and salvage enzymes have now been structurally characterized.
本综述总结了原核生物中硫胺素焦磷酸(TPP)的生物合成过程,以大肠杆菌和枯草芽孢杆菌的途径为例。噻唑杂环由三条独立途径汇聚形成。首先,由1-脱氧-D-木酮糖5-磷酸合酶(Dxs)催化的3-磷酸甘油醛和丙酮酸缩合反应生成1-脱氧-D-木酮糖5-磷酸(DXP)。其次,硫载体蛋白ThiS-COO-在由ThiF、ThiI和NifS(枯草芽孢杆菌中为ThiF和IscS)催化的反应中转化为其羧基末端硫代羧酸盐。最后,酪氨酸(枯草芽孢杆菌中为甘氨酸)由ThiH(枯草芽孢杆菌中为ThiO)转化为脱氢甘氨酸。噻唑合酶(ThiG)催化ThiS-COSH、脱氢甘氨酸和DXP的复杂缩合反应生成噻唑互变异构体,然后由TenI(枯草芽孢杆菌)将其芳构化为羧基噻唑磷酸。羟甲基嘧啶磷酸(HMP-P)由硫胺素C催化的5-氨基咪唑核糖核苷酸(AIR)的复杂重排反应形成。然后ThiD生成羟甲基嘧啶焦磷酸。硫胺素磷酸合酶(ThiE)催化两个杂环的偶联和脱羧反应,生成硫胺素磷酸。由ThiL催化的最终磷酸化反应完成了辅因子生物活性形式TPP的生物合成。本综述回顾了该途径中相关酶的机制和结构研究现状。硫胺素生物合成酶多个直系同源物的可得性也极大地促进了结构研究,目前大多数硫胺素生物合成和补救酶已得到结构表征。