Deep Kamal, Poddar Abhijit, Das Subrata K
Department of Biotechnology, Institute of Life Sciences, Nalco Square, Bhubaneswar, 751 023, India.
Appl Biochem Biotechnol. 2016 Feb;178(4):695-709. doi: 10.1007/s12010-015-1903-9. Epub 2015 Oct 22.
A 1329 nucleotide long endoglucanase gene was amplified from marine bacterium Photobacterium panuliri strain LBS5(T).The enzyme sequence was novel as protein-based similarity search revealed that it shared maximum similarity of 99% with hypothetical protein of P. aquae and 40% with endoglucanase of P. marinum AK15. The gene was cloned, overexpressed in Escherichia coli BL21 (DE3), and purified up to homogeneity using Ni-NTA affinity chromatography. The purified enzyme, designated as Cel8, was monomeric and has a molecular mass of 53 kDa. The enzyme was halostable and exhibited optimal carboxymethyl cellulase (CMCase) activity and stability at 2 M NaCl. Optimal activity was obtained at 40 °C and at pH 4. The enzyme exhibited remarkable stability in different organic solvents (50%, v/v), and activity increased nearly 1.5-fold in presence of butanol, isopropanol, petroleum ether, benzene, acetone, and n-hexane. It was active in Ca(2+), Ba(2+), and Ni(2+) and inhibited by Co(2+), Cd(2+), Zn(2+), Cu(2+), and Hg(2+). Under normal physiological conditions, the enzyme has 25% helix, 30% sheets, and 56% irregularities, whereas salt leads to helix to sheet transition in enzyme. Three-dimensional reconstruction analysis revealed that the enzyme has (α/β)8 structure and a TIM barrel fold-like structure at the central groove of enzyme. This is the first evidenced report on halostable, organic solvent tolerant cellulase in the marine bacterial genus Photobacterium.
从海洋细菌龙虾发光杆菌LBS5(T)中扩增出一个长度为1329个核苷酸的内切葡聚糖酶基因。基于蛋白质的相似性搜索显示,该酶序列具有新颖性,它与水生发光杆菌的假定蛋白的最大相似性为99%,与海生发光杆菌AK15的内切葡聚糖酶的相似性为40%。该基因被克隆,在大肠杆菌BL21(DE3)中过量表达,并使用镍-氮三乙酸亲和层析纯化至同质。纯化后的酶被命名为Cel8,为单体,分子量为53 kDa。该酶具有盐稳定性,在2 M NaCl浓度下表现出最佳的羧甲基纤维素酶(CMCase)活性和稳定性。在40℃和pH 4时获得最佳活性。该酶在不同有机溶剂(50%,v/v)中表现出显著的稳定性,在丁醇、异丙醇、石油醚、苯、丙酮和正己烷存在下活性增加近1.5倍。它在Ca(2+)、Ba(2+)和Ni(2+)中具有活性,而受到Co(2+)、Cd(2+)、Zn(2+)、Cu(2+)和Hg(2+)的抑制。在正常生理条件下,该酶具有25%的螺旋结构、30%的片层结构和56%的不规则结构,而盐会导致酶的螺旋结构向片层结构转变。三维重建分析表明,该酶具有(α/β)8结构,在酶的中央凹槽处具有类似TIM桶的折叠结构。这是关于海洋细菌发光杆菌属中耐盐、耐有机溶剂纤维素酶的首个有证据报道。