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New insights about ORF1 coding regions support the proposition of a new genus comprising arthropod viruses in the family Totiviridae.

作者信息

Dantas Márcia Danielle A, Cavalcante Gustavo Henrique O, Oliveira Raffael A C, Lanza Daniel C F

机构信息

Laboratório de Biologia Molecular Aplicada, Departamento de Bioquímica, Universidade Federal do Rio Grande do Norte, Natal, RN, Brazil; Programa de Pós-Graduação em Bioquímica, Universidade Federal do Rio Grande do Norte, Natal, RN, Brazil.

Laboratório de Biologia Molecular Aplicada, Departamento de Bioquímica, Universidade Federal do Rio Grande do Norte, Natal, RN, Brazil.

出版信息

Virus Res. 2016 Jan 4;211:159-64. doi: 10.1016/j.virusres.2015.10.020. Epub 2015 Oct 20.

Abstract

Analyzing the positions of 2A-like polypeptide cleavage sites in all available genomes of arthropod totiviruses we propose the limits of all ORF1 coding sequences and observed that two proteins previously predicted in infectious myonecrosis virus genome are unique in the arthropod totiviruses group. A putative protein cleavage site upstream the major capsid protein was also identified only in these genomes. In addition, protein models generated using ab initio and threading approaches revealed conserved structures possibly related to formation of viral protrusions and RNA packaging, clarifying the mechanisms involved in the extracellular transmission. These data appoints that the group formed by arthropod totiviruses are sufficient distinctive to be clustered in new genus belonging to the Totiviridae family, in agreement with previous phylogenetic analysis.

摘要

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