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从 NMR 偶极耦合研究蛋白质构象的能量景观和原子分辨率动力学:综述。

Investigating protein conformational energy landscapes and atomic resolution dynamics from NMR dipolar couplings: a review.

机构信息

Université Grenoble Alpes, Institut de Biologie Structurale (IBS), F-38027 Grenoble, France. CEA, DSV, IBS, F-38027 Grenoble, France. CNRS, IBS, F-38027 Grenoble, France.

出版信息

Rep Prog Phys. 2015 Dec;78(12):126601. doi: 10.1088/0034-4885/78/12/126601. Epub 2015 Oct 30.

Abstract

Nuclear magnetic resonance spectroscopy is exquisitely sensitive to protein dynamics. In particular inter-nuclear dipolar couplings, that become measurable in solution when the protein is dissolved in a dilute liquid crystalline solution, report on all conformations sampled up to millisecond timescales. As such they provide the opportunity to describe the Boltzmann distribution present in solution at atomic resolution, and thereby to map the conformational energy landscape in unprecedented detail. The development of analytical methods and approaches based on numerical simulation and their application to numerous biologically important systems is presented.

摘要

核磁共振波谱学对蛋白质动力学非常敏感。特别是核间偶极耦合,当蛋白质溶解在稀液晶溶液中时,在溶液中变得可测量,报告了毫秒时间尺度内所有被采样的构象。因此,它们提供了在原子分辨率下描述溶液中玻尔兹曼分布的机会,从而以前所未有的细节描绘构象能量景观。介绍了基于数值模拟的分析方法和方法的发展及其在许多重要生物系统中的应用。

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